Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yfiQ [H]

Identifier: 74318042

GI number: 74318042

Start: 2113479

End: 2116157

Strand: Reverse

Name: yfiQ [H]

Synonym: Tbd_2024

Alternate gene names: 74318042

Gene position: 2116157-2113479 (Counterclockwise)

Preceding gene: 74318044

Following gene: 74318032

Centisome position: 72.72

GC content: 67.82

Gene sequence:

>2679_bases
ATGCCCCAGCATTATCTCGAACCTCTCTTCAACGCGAGCTCGGTCGCGGTCTTCGGCGCCAGCGAGCGTGAAGACTCGGT
CGCCGGGACGCTGTTCCGCAACCTGCGCCACGCCGGCTACAAAGGCGAGGTCTATCCGATCAACCCTAAGCATGCGGAGA
TTTTTGGCGAACGCTGCTATGCGCGGGCGAGCGAATTGCCCGCCACGCCAGAACTCGCGCTGATCGCAACGCCGGCCACC
ACCGTGGCGGCGATACTCGAAGAATGCGGGCAGCGCGGCATCCGCCATGCGATCGTGCTGTCGGCCGGCTTCGCCGAGAC
CGGCACGCAGGGGATTGAACTCGAGGCGGGCTTGCAGCGCGTCGCGAAGCAGCACGGAATTCGCTTCATCGGCCCGAACT
GCCTCGGCATCCAGCGCCCGGCCATCGGCCTCAACGCGACCTTCAGCCAGGGCGCGACGCAGGCCGGCGACCTCGCGCTG
GTCTCGCAGTCGGGCGCCTTGTGCACGGCGATGCTCGACTGGGCCGAAGCCAACGGCATCGGCTTTTCGAGCGTGGTGTC
GACAGGCGCCTCGGCCGACCTCGATTTCGGCGAAATCCTCGATTACCTCGCCTACGACCGGCAGACCAAGGGCATTCTTC
TGTACATCGAGGGCATACGCGACGCGCGCCGCTTCATGAGCGCGCTGCGCGCGACGTCCCGCTTCAAGCCCATCGTCATG
GTCAAGGTCGGGCGGCACGAGGCCGGCTCGCGCGCCGTGCAGTCGCACACCGGCGCGCTCGTCGGCTCCGATGCCGTCTT
CGACGCGCTCGTGCGGCGCGCCGGCGTCGTCCGCGTAAACACGATCCTGCAGCTCTTCGCCTCCGCGCGCGCGCTCGCGA
CCCATATCCAGCCGTCCGGCAATCGCCTCGCGATCGTCACCAACGGCGGCGGGCCGGGCGTCATGGCGACCGACCTCGCC
GTCGACGTCGGGCTACGCATGGCCGAGCTTTCGCCGGCGACGATCGCGGAACTCGACGCGGTGCTTCCGGCGACCTGGTC
GCGCGGGAACCCGCTCGACATCATTGGCGACGCGACGGCGGAGCGCTACCGTGCAGCCGTCGGCGCCTGCCTGCACGACA
ACAACGTCGACGGCGTGCTCGTGATGCTGACGCCTCAGGCGATGACCCGGCCGACTGCGGTCGCCGACGCGGTCATCGAC
GTTGCCAAGCAGGCGCCCAAGCCCGTGCTGACCTGCTGGATGGGTGAAGCGCAGGTGCACGAGGGACGCCAGCGCTTCAA
GCAGGCGGGCATTCCCTACTTCACCACGCCCGAGCCGGCGGTCGAGGTCTTTTCCTTCCTCGCGGCCTTCTACGAGAACC
AGCGCCAGCTCATGCAGACGCCGGGGCCGCTTTCGCACCAGCTTGAGCCCGACGTCGAAGGCGCGCGCCTGATCATCGAG
AGCGCACTCGCCCACGGCCGTCATCTGCTGAACGAGGTCGAATCGAAGGCGCTGCTGTCGGCCTTCCGCATTCCGATCGC
GCAGACGCTGATCGCGCGCGACCCGATGGAGGCGATGCTGACCGCGCAGCAGATCGGTTTTCCGGTGGCGATGAAGATCA
ATTCGCCCGACATCACCCACAAATCGGACGTCAATGGCGTGCGTCTCGGGCTCTCGAGTGGGCACGCGGTGCGCTCGGCC
TTTGGCGAGATGCTCGCCGACGTCAAGCGGCTTCGGCCCGAGGCGCGGCTGGAGGGCATCGTGATCGAGCCGATGGTGAC
GCGGCCGCACGCGCGTGAAGTCCTGCTCGGCATGACCTCGGATCCGGTGCTCGGCCCGGTGATCGTGTTCGGCGCCGGGG
GCGTCGACGTCGAGGCCTTCCAGGACCGGGCGGTCACGCTGCCGCCGCTCAACACCTACCTCACGCGCGACCTCATCCGC
CGTACCCGCGTCGCGACCCTGCTCGGAAGTTTTCGCAACCGCCCGCCGGTCGACATGGCGGCCCTCGAAAACGTGTTGTT
GCGGCTCTCGGAAATGGTCTGCGAATTGCCCTGGCTCGCCGAGCTCGACATCAACCCCTTGCTGGTCGACGAGGGCGGCG
CGCTCGCGCTCGACGCTCGCATCGTCATCGCGCCGCGCGTGCCCTCGGCCGATCGCTATGGCCACATGGCGATCCATCCG
TATCCGGCGCATCTGGTCACGCACTGGCAGTTGCCGAGCGGCCACGACGTGCTGATCCGCCCGATCCGTCCGGAGGACGC
GGAATTGACGCAGGGCTTCGTGCGCAGCCTGTCCGAGGAGAGCCGCTATTTCCGCTTCATGGACGCGGTGAGCGAGCTGT
CGCCGGTGGCGCTCGCACGGCTCACCCAGATCGATTACACGCGCGAGATGGCGCTTCTGGCGCTCACCGAGATTGACGGT
CGCGAGGTCGAGCTCGGCGTCGCGCGTTACGCCGTTAATGCGGACGGGACCTCGTGCGAGTTCGCGCTCGTCGTCAGCGA
CGCCTGGCAAAAACAGGGCATCGGCCACAAGCTCATGGACGTGCTGATGGACGTCGCGCGCGGCCGCGGGCTGCGTCTCA
TGGAAGGGGAGGTGCTGAAGGCCAACCGTCCGATGCTGAAGCTGGTGGGAAGCCTCGGCTTTCGCATCGAGCCTCACCCC
GAGGACGAGGCGGTGCGCCGGGTTTCGCGTGCGCTCTGA

Upstream 100 bases:

>100_bases
CGTTCTTCTCCACTATACGACAGGTGGCGCGGGCACAGGCGGTGGCCTAGGATGAGCTCACCGCGCCAAGCGCCGCCACG
CCTCTTCGGACCGCCACGCC

Downstream 100 bases:

>100_bases
GCGCGGCTACGGCGCTTCGACCGCGACCGGCCGGCGGCGCTGGGTGCAGACCTGGTTGCGGCCCGCTTCCTTGGCGGCAT
AGAGCGCCTGATCCGCCGCG

Product: long-chain fatty-acid-CoA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 892; Mature: 891

Protein sequence:

>892_residues
MPQHYLEPLFNASSVAVFGASEREDSVAGTLFRNLRHAGYKGEVYPINPKHAEIFGERCYARASELPATPELALIATPAT
TVAAILEECGQRGIRHAIVLSAGFAETGTQGIELEAGLQRVAKQHGIRFIGPNCLGIQRPAIGLNATFSQGATQAGDLAL
VSQSGALCTAMLDWAEANGIGFSSVVSTGASADLDFGEILDYLAYDRQTKGILLYIEGIRDARRFMSALRATSRFKPIVM
VKVGRHEAGSRAVQSHTGALVGSDAVFDALVRRAGVVRVNTILQLFASARALATHIQPSGNRLAIVTNGGGPGVMATDLA
VDVGLRMAELSPATIAELDAVLPATWSRGNPLDIIGDATAERYRAAVGACLHDNNVDGVLVMLTPQAMTRPTAVADAVID
VAKQAPKPVLTCWMGEAQVHEGRQRFKQAGIPYFTTPEPAVEVFSFLAAFYENQRQLMQTPGPLSHQLEPDVEGARLIIE
SALAHGRHLLNEVESKALLSAFRIPIAQTLIARDPMEAMLTAQQIGFPVAMKINSPDITHKSDVNGVRLGLSSGHAVRSA
FGEMLADVKRLRPEARLEGIVIEPMVTRPHAREVLLGMTSDPVLGPVIVFGAGGVDVEAFQDRAVTLPPLNTYLTRDLIR
RTRVATLLGSFRNRPPVDMAALENVLLRLSEMVCELPWLAELDINPLLVDEGGALALDARIVIAPRVPSADRYGHMAIHP
YPAHLVTHWQLPSGHDVLIRPIRPEDAELTQGFVRSLSEESRYFRFMDAVSELSPVALARLTQIDYTREMALLALTEIDG
REVELGVARYAVNADGTSCEFALVVSDAWQKQGIGHKLMDVLMDVARGRGLRLMEGEVLKANRPMLKLVGSLGFRIEPHP
EDEAVRRVSRAL

Sequences:

>Translated_892_residues
MPQHYLEPLFNASSVAVFGASEREDSVAGTLFRNLRHAGYKGEVYPINPKHAEIFGERCYARASELPATPELALIATPAT
TVAAILEECGQRGIRHAIVLSAGFAETGTQGIELEAGLQRVAKQHGIRFIGPNCLGIQRPAIGLNATFSQGATQAGDLAL
VSQSGALCTAMLDWAEANGIGFSSVVSTGASADLDFGEILDYLAYDRQTKGILLYIEGIRDARRFMSALRATSRFKPIVM
VKVGRHEAGSRAVQSHTGALVGSDAVFDALVRRAGVVRVNTILQLFASARALATHIQPSGNRLAIVTNGGGPGVMATDLA
VDVGLRMAELSPATIAELDAVLPATWSRGNPLDIIGDATAERYRAAVGACLHDNNVDGVLVMLTPQAMTRPTAVADAVID
VAKQAPKPVLTCWMGEAQVHEGRQRFKQAGIPYFTTPEPAVEVFSFLAAFYENQRQLMQTPGPLSHQLEPDVEGARLIIE
SALAHGRHLLNEVESKALLSAFRIPIAQTLIARDPMEAMLTAQQIGFPVAMKINSPDITHKSDVNGVRLGLSSGHAVRSA
FGEMLADVKRLRPEARLEGIVIEPMVTRPHAREVLLGMTSDPVLGPVIVFGAGGVDVEAFQDRAVTLPPLNTYLTRDLIR
RTRVATLLGSFRNRPPVDMAALENVLLRLSEMVCELPWLAELDINPLLVDEGGALALDARIVIAPRVPSADRYGHMAIHP
YPAHLVTHWQLPSGHDVLIRPIRPEDAELTQGFVRSLSEESRYFRFMDAVSELSPVALARLTQIDYTREMALLALTEIDG
REVELGVARYAVNADGTSCEFALVVSDAWQKQGIGHKLMDVLMDVARGRGLRLMEGEVLKANRPMLKLVGSLGFRIEPHP
EDEAVRRVSRAL
>Mature_891_residues
PQHYLEPLFNASSVAVFGASEREDSVAGTLFRNLRHAGYKGEVYPINPKHAEIFGERCYARASELPATPELALIATPATT
VAAILEECGQRGIRHAIVLSAGFAETGTQGIELEAGLQRVAKQHGIRFIGPNCLGIQRPAIGLNATFSQGATQAGDLALV
SQSGALCTAMLDWAEANGIGFSSVVSTGASADLDFGEILDYLAYDRQTKGILLYIEGIRDARRFMSALRATSRFKPIVMV
KVGRHEAGSRAVQSHTGALVGSDAVFDALVRRAGVVRVNTILQLFASARALATHIQPSGNRLAIVTNGGGPGVMATDLAV
DVGLRMAELSPATIAELDAVLPATWSRGNPLDIIGDATAERYRAAVGACLHDNNVDGVLVMLTPQAMTRPTAVADAVIDV
AKQAPKPVLTCWMGEAQVHEGRQRFKQAGIPYFTTPEPAVEVFSFLAAFYENQRQLMQTPGPLSHQLEPDVEGARLIIES
ALAHGRHLLNEVESKALLSAFRIPIAQTLIARDPMEAMLTAQQIGFPVAMKINSPDITHKSDVNGVRLGLSSGHAVRSAF
GEMLADVKRLRPEARLEGIVIEPMVTRPHAREVLLGMTSDPVLGPVIVFGAGGVDVEAFQDRAVTLPPLNTYLTRDLIRR
TRVATLLGSFRNRPPVDMAALENVLLRLSEMVCELPWLAELDINPLLVDEGGALALDARIVIAPRVPSADRYGHMAIHPY
PAHLVTHWQLPSGHDVLIRPIRPEDAELTQGFVRSLSEESRYFRFMDAVSELSPVALARLTQIDYTREMALLALTEIDGR
EVELGVARYAVNADGTSCEFALVVSDAWQKQGIGHKLMDVLMDVARGRGLRLMEGEVLKANRPMLKLVGSLGFRIEPHPE
DEAVRRVSRAL

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=887, Percent_Identity=36.1894024802706, Blast_Score=550, Evalue=1e-157,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR011761
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR016102 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 96496; Mature: 96365

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQHYLEPLFNASSVAVFGASEREDSVAGTLFRNLRHAGYKGEVYPINPKHAEIFGERCY
CCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHH
ARASELPATPELALIATPATTVAAILEECGQRGIRHAIVLSAGFAETGTQGIELEAGLQR
HHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEHHHHHHH
VAKQHGIRFIGPNCLGIQRPAIGLNATFSQGATQAGDLALVSQSGALCTAMLDWAEANGI
HHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHCCCC
GFSSVVSTGASADLDFGEILDYLAYDRQTKGILLYIEGIRDARRFMSALRATSRFKPIVM
CHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEE
VKVGRHEAGSRAVQSHTGALVGSDAVFDALVRRAGVVRVNTILQLFASARALATHIQPSG
EEECCCCCCHHHHHHHCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
NRLAIVTNGGGPGVMATDLAVDVGLRMAELSPATIAELDAVLPATWSRGNPLDIIGDATA
CEEEEEECCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCHHH
ERYRAAVGACLHDNNVDGVLVMLTPQAMTRPTAVADAVIDVAKQAPKPVLTCWMGEAQVH
HHHHHHHHHHEECCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHH
EGRQRFKQAGIPYFTTPEPAVEVFSFLAAFYENQRQLMQTPGPLSHQLEPDVEGARLIIE
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
SALAHGRHLLNEVESKALLSAFRIPIAQTLIARDPMEAMLTAQQIGFPVAMKINSPDITH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCC
KSDVNGVRLGLSSGHAVRSAFGEMLADVKRLRPEARLEGIVIEPMVTRPHAREVLLGMTS
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCHHHHHCCCCC
DPVLGPVIVFGAGGVDVEAFQDRAVTLPPLNTYLTRDLIRRTRVATLLGSFRNRPPVDMA
CCCCCCEEEEECCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALENVLLRLSEMVCELPWLAELDINPLLVDEGGALALDARIVIAPRVPSADRYGHMAIHP
HHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEECC
YPAHLVTHWQLPSGHDVLIRPIRPEDAELTQGFVRSLSEESRYFRFMDAVSELSPVALAR
CCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LTQIDYTREMALLALTEIDGREVELGVARYAVNADGTSCEFALVVSDAWQKQGIGHKLMD
HHHHHHHHHHHHHEEECCCCCEEEEEEEEEEECCCCCCEEEEEEEEHHHHHCCCCHHHHH
VLMDVARGRGLRLMEGEVLKANRPMLKLVGSLGFRIEPHPEDEAVRRVSRAL
HHHHHHCCCCEEEECCCEECCCCHHHHHHHHCCCEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PQHYLEPLFNASSVAVFGASEREDSVAGTLFRNLRHAGYKGEVYPINPKHAEIFGERCY
CCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHH
ARASELPATPELALIATPATTVAAILEECGQRGIRHAIVLSAGFAETGTQGIELEAGLQR
HHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEHHHHHHH
VAKQHGIRFIGPNCLGIQRPAIGLNATFSQGATQAGDLALVSQSGALCTAMLDWAEANGI
HHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHCCCC
GFSSVVSTGASADLDFGEILDYLAYDRQTKGILLYIEGIRDARRFMSALRATSRFKPIVM
CHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEE
VKVGRHEAGSRAVQSHTGALVGSDAVFDALVRRAGVVRVNTILQLFASARALATHIQPSG
EEECCCCCCHHHHHHHCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
NRLAIVTNGGGPGVMATDLAVDVGLRMAELSPATIAELDAVLPATWSRGNPLDIIGDATA
CEEEEEECCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCHHH
ERYRAAVGACLHDNNVDGVLVMLTPQAMTRPTAVADAVIDVAKQAPKPVLTCWMGEAQVH
HHHHHHHHHHEECCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHH
EGRQRFKQAGIPYFTTPEPAVEVFSFLAAFYENQRQLMQTPGPLSHQLEPDVEGARLIIE
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
SALAHGRHLLNEVESKALLSAFRIPIAQTLIARDPMEAMLTAQQIGFPVAMKINSPDITH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCC
KSDVNGVRLGLSSGHAVRSAFGEMLADVKRLRPEARLEGIVIEPMVTRPHAREVLLGMTS
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCHHHHHCCCCC
DPVLGPVIVFGAGGVDVEAFQDRAVTLPPLNTYLTRDLIRRTRVATLLGSFRNRPPVDMA
CCCCCCEEEEECCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALENVLLRLSEMVCELPWLAELDINPLLVDEGGALALDARIVIAPRVPSADRYGHMAIHP
HHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEECC
YPAHLVTHWQLPSGHDVLIRPIRPEDAELTQGFVRSLSEESRYFRFMDAVSELSPVALAR
CCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LTQIDYTREMALLALTEIDGREVELGVARYAVNADGTSCEFALVVSDAWQKQGIGHKLMD
HHHHHHHHHHHHHEEECCCCCEEEEEEEEEEECCCCCCEEEEEEEEHHHHHCCCCHHHHH
VLMDVARGRGLRLMEGEVLKANRPMLKLVGSLGFRIEPHPEDEAVRRVSRAL
HHHHHHCCCCEEEECCCEECCCCHHHHHHHHCCCEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]