Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318012

Identifier: 74318012

GI number: 74318012

Start: 2083736

End: 2084140

Strand: Reverse

Name: 74318012

Synonym: Tbd_1994

Alternate gene names: NA

Gene position: 2084140-2083736 (Counterclockwise)

Preceding gene: 74318017

Following gene: 74318011

Centisome position: 71.62

GC content: 60.25

Gene sequence:

>405_bases
ATGCACATCATAAAGCAGCTCATGGCCATTCCCGGGGTGGTCGCTGCCGGCGAATACGCGTACCGCGGTGATCGCTTCTC
CTACCAGGGCGCACTGACCGACGAGTTCGCACGCATGGCGTCGATTCTCTGCCGCGCCAACACGCTGTCGGTCAACATGC
AGTCGGAGATCTTCGATTCCTTTGCCGAAAATTGCGGCTGTCGCCCGGTCCAGGGCTGGATCGTGCGCGGCGCCGAGATC
ACGGTCTGCGTCGTCGGAAACTATTTTGCCTTCATCGAAAACCGTCACGATCTGCTCAACGACGTGATGACGATCATGCG
CGCCAAGATCGGCGACATCGAGGACGATCTGCTCGTGAATCTTTACGCGCGGATCGGCGGCGACGCGCGCGAAGCGCTGT
ACTGA

Upstream 100 bases:

>100_bases
GAAGGTTGTTGCGTTGTCTTGCATGGTCGCTCTATATTGAAACCGGTGCGACACTTTGCCACACCGCGCCGCACACGAAT
CAGAACAACGGAGGGGCTCG

Downstream 100 bases:

>100_bases
AGTCCGATATCAACAAGGGAGGGGTATGGATCTGCAAAAACTGATGGAGTTGCCGGGTGCGCTCGCCGCATTCACCTACA
GCGATCGCGGGGACCTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MHIIKQLMAIPGVVAAGEYAYRGDRFSYQGALTDEFARMASILCRANTLSVNMQSEIFDSFAENCGCRPVQGWIVRGAEI
TVCVVGNYFAFIENRHDLLNDVMTIMRAKIGDIEDDLLVNLYARIGGDAREALY

Sequences:

>Translated_134_residues
MHIIKQLMAIPGVVAAGEYAYRGDRFSYQGALTDEFARMASILCRANTLSVNMQSEIFDSFAENCGCRPVQGWIVRGAEI
TVCVVGNYFAFIENRHDLLNDVMTIMRAKIGDIEDDLLVNLYARIGGDAREALY
>Mature_134_residues
MHIIKQLMAIPGVVAAGEYAYRGDRFSYQGALTDEFARMASILCRANTLSVNMQSEIFDSFAENCGCRPVQGWIVRGAEI
TVCVVGNYFAFIENRHDLLNDVMTIMRAKIGDIEDDLLVNLYARIGGDAREALY

Specific function: Unknown

COG id: COG4831

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14947; Mature: 14947

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIIKQLMAIPGVVAAGEYAYRGDRFSYQGALTDEFARMASILCRANTLSVNMQSEIFDS
CHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEECHHHHHHHH
FAENCGCRPVQGWIVRGAEITVCVVGNYFAFIENRHDLLNDVMTIMRAKIGDIEDDLLVN
HHHHCCCCCCHHEEEECCEEEEEEECCHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHH
LYARIGGDAREALY
HHHHHCCCHHHHCC
>Mature Secondary Structure
MHIIKQLMAIPGVVAAGEYAYRGDRFSYQGALTDEFARMASILCRANTLSVNMQSEIFDS
CHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEECHHHHHHHH
FAENCGCRPVQGWIVRGAEITVCVVGNYFAFIENRHDLLNDVMTIMRAKIGDIEDDLLVN
HHHHCCCCCCHHEEEECCEEEEEEECCHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHH
LYARIGGDAREALY
HHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA