Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318011

Identifier: 74318011

GI number: 74318011

Start: 2083372

End: 2083710

Strand: Reverse

Name: 74318011

Synonym: Tbd_1993

Alternate gene names: NA

Gene position: 2083710-2083372 (Counterclockwise)

Preceding gene: 74318012

Following gene: 74318010

Centisome position: 71.61

GC content: 62.83

Gene sequence:

>339_bases
ATGGATCTGCAAAAACTGATGGAGTTGCCGGGTGCGCTCGCCGCATTCACCTACAGCGATCGCGGGGACCTGCAGGCGCA
CGAACTGCGCGAAGGCACCGAAATCACTCCGCAGATGCTCGATCTGTTGAGCCGTTCCTGTGTCGCCAATCTCGCGATTG
CCGGCATGGAGGCGCGCGGCTGGGAAGCGGTCACCGGACAGAGCGGCTTTCAGCCGCTGAAAGGCTTTTCGGTGGTCGGC
CTCGAATGGTCGGTCGTCGTGAACGGCAATAGCGGCGTGGTCATACGCAACCGCGACGTCGACTACGAAGCCGCGTTCGC
CGCGCTGCAAGTCGCCTGA

Upstream 100 bases:

>100_bases
GGCGACATCGAGGACGATCTGCTCGTGAATCTTTACGCGCGGATCGGCGGCGACGCGCGCGAAGCGCTGTACTGAAGTCC
GATATCAACAAGGGAGGGGT

Downstream 100 bases:

>100_bases
GGAGGCTCCATGTCGCTGAAGAAGATCCTGGTGCTCGACGGGGTGATGACCGTGTGCCGCTTTCGCGACGACGGCGTGGT
GATGGAGGCCGAGGGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MDLQKLMELPGALAAFTYSDRGDLQAHELREGTEITPQMLDLLSRSCVANLAIAGMEARGWEAVTGQSGFQPLKGFSVVG
LEWSVVVNGNSGVVIRNRDVDYEAAFAALQVA

Sequences:

>Translated_112_residues
MDLQKLMELPGALAAFTYSDRGDLQAHELREGTEITPQMLDLLSRSCVANLAIAGMEARGWEAVTGQSGFQPLKGFSVVG
LEWSVVVNGNSGVVIRNRDVDYEAAFAALQVA
>Mature_112_residues
MDLQKLMELPGALAAFTYSDRGDLQAHELREGTEITPQMLDLLSRSCVANLAIAGMEARGWEAVTGQSGFQPLKGFSVVG
LEWSVVVNGNSGVVIRNRDVDYEAAFAALQVA

Specific function: Unknown

COG id: COG4831

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12042; Mature: 12042

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQKLMELPGALAAFTYSDRGDLQAHELREGTEITPQMLDLLSRSCVANLAIAGMEARG
CCHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
WEAVTGQSGFQPLKGFSVVGLEWSVVVNGNSGVVIRNRDVDYEAAFAALQVA
CEEECCCCCCCCCCCCEEECEEEEEEEECCCCEEEECCCCCHHHHHEEEECC
>Mature Secondary Structure
MDLQKLMELPGALAAFTYSDRGDLQAHELREGTEITPQMLDLLSRSCVANLAIAGMEARG
CCHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
WEAVTGQSGFQPLKGFSVVGLEWSVVVNGNSGVVIRNRDVDYEAAFAALQVA
CEEECCCCCCCCCCCCEEECEEEEEEEECCCCEEEECCCCCHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA