| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is pssA [H]
Identifier: 74318005
GI number: 74318005
Start: 2077979
End: 2078767
Strand: Reverse
Name: pssA [H]
Synonym: Tbd_1987
Alternate gene names: 74318005
Gene position: 2078767-2077979 (Counterclockwise)
Preceding gene: 74318006
Following gene: 74318004
Centisome position: 71.44
GC content: 64.26
Gene sequence:
>789_bases ATGCTCGAATACCACCATCGCAAGACCGAATCACGCCACACCCGGATGCGCGACCGCGGCATCTATCTGCTGCCCAATCT CTTCACGACCGGCGCGCTGTTCGCGGGCTTCTACGCCGTCGTGCAGGCGATGAATGGCCGCTTCGAACACGCGGCGGTCG CGATCTTTATCGCCATGGTGCTCGACGGACTCGACGGCCGGGTCGCGCGGATGACCCGCACGCAGAGCGCCTTCGGCGCC GAGTACGACAGCCTCTCCGACATGGTGTCATTCGGCGTCGCGCCGGCGCTCGTGATCTACGAATTCGCGCTACAGGGTAT GGGAAAGCTCGGCTGGATCGCCGCTTTTGTCTACTGTGCGGGCGCTGCCCTGCGCCTCGCGCGCTTCAACACCCAGCTGG ATGTCGTCACCGACAAGCGCTTTTTCCAGGGCCTGCCGAGCCCGTCGGCCGCCGCGCTGATCGCGGGTTTCGTCTGGGTC ATGGTCGAGTACGGGGTCGTCGGCGAGGACGTGCGCTGGCTCGCCGCCATCATCGCGCTCTTCGGCGGGCTGACGATGGT CAGCAACTTCCGCTACTACAGCGGCAAGGAAATCAACCTGCGCAAAAGCGTGCCCTTCTTCGTCATCCTGCTGATCGTGC TCGCCTTCATCCTGATCTCGACGAGCCCGCCCGAAGTGCTGTTCGGCGTGTTCCTGCTCTACGGCCTCTCGGGCTACGGT TACGCGGTATGGTTGCTGTGGCAGCGCCGCAAGGCCTCCGCAGCGGGCTTGCAGGGCGAACAAAAATAG
Upstream 100 bases:
>100_bases TTTTAGCGCGGCGCGGCCTTCACGCGCGCCCCACCTAGCGGTCCCGGTTTGTCGCGGCAGCACCGCCGCGATATTTGTGT CAACACGCCCTGGGTTCGTC
Downstream 100 bases:
>100_bases ATAGAATTTGGACCATGTCCAATTGGTCGCAACCCTCCTTCCTCCTCTGCCTGTCGAGCCTCCTGTTCGGCAGCCTGCTG CTGCGCGTCGCGCGCGCACA
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MLEYHHRKTESRHTRMRDRGIYLLPNLFTTGALFAGFYAVVQAMNGRFEHAAVAIFIAMVLDGLDGRVARMTRTQSAFGA EYDSLSDMVSFGVAPALVIYEFALQGMGKLGWIAAFVYCAGAALRLARFNTQLDVVTDKRFFQGLPSPSAAALIAGFVWV MVEYGVVGEDVRWLAAIIALFGGLTMVSNFRYYSGKEINLRKSVPFFVILLIVLAFILISTSPPEVLFGVFLLYGLSGYG YAVWLLWQRRKASAAGLQGEQK
Sequences:
>Translated_262_residues MLEYHHRKTESRHTRMRDRGIYLLPNLFTTGALFAGFYAVVQAMNGRFEHAAVAIFIAMVLDGLDGRVARMTRTQSAFGA EYDSLSDMVSFGVAPALVIYEFALQGMGKLGWIAAFVYCAGAALRLARFNTQLDVVTDKRFFQGLPSPSAAALIAGFVWV MVEYGVVGEDVRWLAAIIALFGGLTMVSNFRYYSGKEINLRKSVPFFVILLIVLAFILISTSPPEVLFGVFLLYGLSGYG YAVWLLWQRRKASAAGLQGEQK >Mature_262_residues MLEYHHRKTESRHTRMRDRGIYLLPNLFTTGALFAGFYAVVQAMNGRFEHAAVAIFIAMVLDGLDGRVARMTRTQSAFGA EYDSLSDMVSFGVAPALVIYEFALQGMGKLGWIAAFVYCAGAALRLARFNTQLDVVTDKRFFQGLPSPSAAALIAGFVWV MVEYGVVGEDVRWLAAIIALFGGLTMVSNFRYYSGKEINLRKSVPFFVILLIVLAFILISTSPPEVLFGVFLLYGLSGYG YAVWLLWQRRKASAAGLQGEQK
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=182, Percent_Identity=35.1648351648352, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 29012; Mature: 29012
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEYHHRKTESRHTRMRDRGIYLLPNLFTTGALFAGFYAVVQAMNGRFEHAAVAIFIAMV CCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LDGLDGRVARMTRTQSAFGAEYDSLSDMVSFGVAPALVIYEFALQGMGKLGWIAAFVYCA HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GAALRLARFNTQLDVVTDKRFFQGLPSPSAAALIAGFVWVMVEYGVVGEDVRWLAAIIAL HHHHHHHHHCCCEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FGGLTMVSNFRYYSGKEINLRKSVPFFVILLIVLAFILISTSPPEVLFGVFLLYGLSGYG HHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC YAVWLLWQRRKASAAGLQGEQK HHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLEYHHRKTESRHTRMRDRGIYLLPNLFTTGALFAGFYAVVQAMNGRFEHAAVAIFIAMV CCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LDGLDGRVARMTRTQSAFGAEYDSLSDMVSFGVAPALVIYEFALQGMGKLGWIAAFVYCA HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GAALRLARFNTQLDVVTDKRFFQGLPSPSAAALIAGFVWVMVEYGVVGEDVRWLAAIIAL HHHHHHHHHCCCEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FGGLTMVSNFRYYSGKEINLRKSVPFFVILLIVLAFILISTSPPEVLFGVFLLYGLSGYG HHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC YAVWLLWQRRKASAAGLQGEQK HHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]