| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317987
Identifier: 74317987
GI number: 74317987
Start: 2060306
End: 2061073
Strand: Reverse
Name: 74317987
Synonym: Tbd_1969
Alternate gene names: NA
Gene position: 2061073-2060306 (Counterclockwise)
Preceding gene: 74317990
Following gene: 74317986
Centisome position: 70.83
GC content: 60.68
Gene sequence:
>768_bases ATGGGGAGGCTGACCGAGCCGAAAGTTGCTTTACTGAAGTTTGACGACGACAGGACGGCAACGACGGAGGTCAGCCAAAT GGATCGTAGCAGACGTACAAGGCGACTGCGCCGCGAAGTGTGGGAACTGCGACATCGATTTGCCCAAGGCGGGCAAGGAG TGTTCGAACAAGTATTGCCGACGGAGGAGATCATGGGGACGATCGAGGAATCCGCGCCAGTCTTTCGTCATCGGCACTAT CCCCCGTTGACGACCTTGCGCCACTTCATCGAACAGGTGCTTTCCGAAGACCAAGCGTGCCAGGACGTGGTTGGCCGCCG CCTCTCGGAACGGGTCGGCCAAAGGCAAAGCACCTGCAGCTTGAACACGTCAGCCTACTGCCAGGCGCGGCAACGTCTGC CGCAGGAGATGGTGGATCGGCTGTATCGGACCACGGGCGAACGGCTGGAAACCCGCCTGCCGAAGTCGTGGCGTTGGCGC GGACGGCGGCTGGTGCTGTTTGATGGCACCACGGTGTCAATGCCGGATACGCTCGCGAGCCAGTGCGCTTTCCCCCAAAG CGCGGAGCAGCAGCCCGGACTGGGCTTCCCGGTTGCGCGTTTGAGCGGATTGATCGGACTGGCCAGCGGAGCGGTACTGG GCCATGCAGTTAGCGCCTGCGAAGGCAAAGGCAGCGGCGGAATACCTCAGGGTCAGGTCTTGCAAAATCACATTCTCCCC TCTGAAATCAACAATTGGGGCCAGACACCATGTCCCTGCAATTGTTAG
Upstream 100 bases:
>100_bases TTACGGAGAGGACAAGCGGCGCCAGCGCAACGAAATAAAGGATGAACGCGCCAATAGTGAAAATGGGGTCAGATACTCAT GGCGCTAAGTTAAGCTCCCG
Downstream 100 bases:
>100_bases CCACGGTGAAAATGACATGCATGCAGATCTGAACGAGCGCGTGGCGGTGGCGACGCAAACGGCGCCCTGGCTCGCGACGG CGGACGGCGAGGGGGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Transposase
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MGRLTEPKVALLKFDDDRTATTEVSQMDRSRRTRRLRREVWELRHRFAQGGQGVFEQVLPTEEIMGTIEESAPVFRHRHY PPLTTLRHFIEQVLSEDQACQDVVGRRLSERVGQRQSTCSLNTSAYCQARQRLPQEMVDRLYRTTGERLETRLPKSWRWR GRRLVLFDGTTVSMPDTLASQCAFPQSAEQQPGLGFPVARLSGLIGLASGAVLGHAVSACEGKGSGGIPQGQVLQNHILP SEINNWGQTPCPCNC
Sequences:
>Translated_255_residues MGRLTEPKVALLKFDDDRTATTEVSQMDRSRRTRRLRREVWELRHRFAQGGQGVFEQVLPTEEIMGTIEESAPVFRHRHY PPLTTLRHFIEQVLSEDQACQDVVGRRLSERVGQRQSTCSLNTSAYCQARQRLPQEMVDRLYRTTGERLETRLPKSWRWR GRRLVLFDGTTVSMPDTLASQCAFPQSAEQQPGLGFPVARLSGLIGLASGAVLGHAVSACEGKGSGGIPQGQVLQNHILP SEINNWGQTPCPCNC >Mature_254_residues GRLTEPKVALLKFDDDRTATTEVSQMDRSRRTRRLRREVWELRHRFAQGGQGVFEQVLPTEEIMGTIEESAPVFRHRHYP PLTTLRHFIEQVLSEDQACQDVVGRRLSERVGQRQSTCSLNTSAYCQARQRLPQEMVDRLYRTTGERLETRLPKSWRWRG RRLVLFDGTTVSMPDTLASQCAFPQSAEQQPGLGFPVARLSGLIGLASGAVLGHAVSACEGKGSGGIPQGQVLQNHILPS EINNWGQTPCPCNC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28654; Mature: 28523
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLTEPKVALLKFDDDRTATTEVSQMDRSRRTRRLRREVWELRHRFAQGGQGVFEQVLP CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC TEEIMGTIEESAPVFRHRHYPPLTTLRHFIEQVLSEDQACQDVVGRRLSERVGQRQSTCS HHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCC LNTSAYCQARQRLPQEMVDRLYRTTGERLETRLPKSWRWRGRRLVLFDGTTVSMPDTLAS CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCEECCCHHHHH QCAFPQSAEQQPGLGFPVARLSGLIGLASGAVLGHAVSACEGKGSGGIPQGQVLQNHILP HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCH SEINNWGQTPCPCNC HHHHCCCCCCCCCCC >Mature Secondary Structure GRLTEPKVALLKFDDDRTATTEVSQMDRSRRTRRLRREVWELRHRFAQGGQGVFEQVLP CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC TEEIMGTIEESAPVFRHRHYPPLTTLRHFIEQVLSEDQACQDVVGRRLSERVGQRQSTCS HHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCC LNTSAYCQARQRLPQEMVDRLYRTTGERLETRLPKSWRWRGRRLVLFDGTTVSMPDTLAS CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCEECCCHHHHH QCAFPQSAEQQPGLGFPVARLSGLIGLASGAVLGHAVSACEGKGSGGIPQGQVLQNHILP HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCH SEINNWGQTPCPCNC HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA