| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317977
Identifier: 74317977
GI number: 74317977
Start: 2053418
End: 2053921
Strand: Reverse
Name: 74317977
Synonym: Tbd_1959
Alternate gene names: NA
Gene position: 2053921-2053418 (Counterclockwise)
Preceding gene: 74317978
Following gene: 74317975
Centisome position: 70.59
GC content: 63.49
Gene sequence:
>504_bases ATGCCGAAGCAATCGACGTGTCGAATCGTCCGCACCGTAGCGCTCACGCTGGGCATGGCCTGTGCCGTGCCGACTGCTTC AGCCGAGTGGGGCGTGAACCTGTACGGCCTGTCGTATCACTGGGAGCGCGATACCGCCGAGGAAAACGACTGGGACAATG AATTCAACCCCGGCCTCGGCCTGCGCTATACCTTTGGCGAATGGCTGAACGCCTCGGCCTTCGCCGACGCCGGCGCGTAT TACGACTCGGGGCGCAACACCGCGGTGTACGGAGCGGCCGGGCTGCTGTGGCCGCTCGATCGCGAGGGGCGCTTCAATCT CGGCGCCGCGCTGACGGCGTTCCATAGCGACACCTACAACAACGGCGACGCCTTCATCGCGCCGATCCCGCTGCTTGCGG TGCGCTTCGACCACGTGACGGTGAATTTCACCCATTTCCCCAAGGTGAGCGACTTCAACTCGGTCAATACGACCGCGATG TTCGTGACCATTCCGATCCGCTGA
Upstream 100 bases:
>100_bases CTCTGTCCGTTGTTCATTAGCGATGGCCGTGCGCACGTTCGTTGTCTCAGTAGGCACGCGACCTATAGTGGAGGGAGTCC GAACTTCAGAGGAAGAGTCC
Downstream 100 bases:
>100_bases GTCGGGTTTCAGACCGGCTCGCGTCCAGGCGAACTTCGAGATCGGCTCTGGCATTGCCGAGGCGAAAGCCTGCGGTGCGG CACGCATGGCGTGCGTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MPKQSTCRIVRTVALTLGMACAVPTASAEWGVNLYGLSYHWERDTAEENDWDNEFNPGLGLRYTFGEWLNASAFADAGAY YDSGRNTAVYGAAGLLWPLDREGRFNLGAALTAFHSDTYNNGDAFIAPIPLLAVRFDHVTVNFTHFPKVSDFNSVNTTAM FVTIPIR
Sequences:
>Translated_167_residues MPKQSTCRIVRTVALTLGMACAVPTASAEWGVNLYGLSYHWERDTAEENDWDNEFNPGLGLRYTFGEWLNASAFADAGAY YDSGRNTAVYGAAGLLWPLDREGRFNLGAALTAFHSDTYNNGDAFIAPIPLLAVRFDHVTVNFTHFPKVSDFNSVNTTAM FVTIPIR >Mature_166_residues PKQSTCRIVRTVALTLGMACAVPTASAEWGVNLYGLSYHWERDTAEENDWDNEFNPGLGLRYTFGEWLNASAFADAGAYY DSGRNTAVYGAAGLLWPLDREGRFNLGAALTAFHSDTYNNGDAFIAPIPLLAVRFDHVTVNFTHFPKVSDFNSVNTTAMF VTIPIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18437; Mature: 18306
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQSTCRIVRTVALTLGMACAVPTASAEWGVNLYGLSYHWERDTAEENDWDNEFNPGLG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC LRYTFGEWLNASAFADAGAYYDSGRNTAVYGAAGLLWPLDREGRFNLGAALTAFHSDTYN EEEECHHHCCCCHHCCCCCEECCCCCEEEEECCEEEEECCCCCCCCCCEEEEEEECCCCC NGDAFIAPIPLLAVRFDHVTVNFTHFPKVSDFNSVNTTAMFVTIPIR CCCEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure PKQSTCRIVRTVALTLGMACAVPTASAEWGVNLYGLSYHWERDTAEENDWDNEFNPGLG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC LRYTFGEWLNASAFADAGAYYDSGRNTAVYGAAGLLWPLDREGRFNLGAALTAFHSDTYN EEEECHHHCCCCHHCCCCCEECCCCCEEEEECCEEEEECCCCCCCCCCEEEEEEECCCCC NGDAFIAPIPLLAVRFDHVTVNFTHFPKVSDFNSVNTTAMFVTIPIR CCCEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA