Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317975

Identifier: 74317975

GI number: 74317975

Start: 2051115

End: 2052044

Strand: Reverse

Name: 74317975

Synonym: Tbd_1957

Alternate gene names: NA

Gene position: 2052044-2051115 (Counterclockwise)

Preceding gene: 74317977

Following gene: 74317973

Centisome position: 70.52

GC content: 63.23

Gene sequence:

>930_bases
ATGGACAACCCAAGAAGCATTCGAGTGCATGCCTCGGAGCTCGAGGTCGGCAGGCCTTTGTCTTGGGCCGTCTACGACGA
AAACGGCGTGCTGCTACTCAACAAAGGGATGGCACCTGCCACCGAGGCACAAATCATTGCGATGCTTCAGCGGGGAGTAT
TCCGACAGCCCGGCTCCGGCGTTGGCGCCGGGGCCGCGGGATCCAAATCCGCCATTCCGCCGATGGGTCTGGGGCCGTCC
GAGGACGAGAGCAAGACCAGGCTCACGGGCGACCCGATCCCGTTCGACGATCTTGCGATGCAGCCCGGCGAGGTTCTGCA
GCTGCATCCTGCTCTCGAAGTAGTGGCGGCAGACGTGCCGGCGGTGCTGATCGGTTATCTCAAGGACCGGGCCATCGTGG
TGGCCACGCCGATGGTGTCCGGCAAGCCCTTGCTGGTGAAGGACGGCACGCTCTTCAATATCAAGACATTTTCCGGGACG
AGCCTATACAACTTCCGCACCCGCGTGCTGGCCTCGCATTCCCATCCGATGCCGCACCTTCACCTTGAGTATCCCCGGCT
GGTCTGCCAGACCAAGATCAGGAAGGCGCTGCGCGCCCTCACGGATCTGCCGGCCACGCTGCTGAACCCGGCGAGCGGCG
ACAGCCGCGACGTCGTTTTGAAAGACCTGAGCGTAGGCGGCGCCAAGATCGTGCTGCCTGAGCCCGTGACATGCGCCAAG
GGCGATCCGTTCGTGGTCGGCTTCAGGATCAAGATCGGCGACGACCTCGAAGAGGCGATCCGCGCGGATGCCGTGATGTG
TTCCGCCGAGTCGCGCACGGGGAAGGAAACGACGGTCCATACGATGAGCGTGCAGTTCAAGGAACTGCCCAAGTCGACCA
GCCTCGCGATCATGGCGCTGGTGTACCGGCTGCAGTTGCGTAAGGGCTGA

Upstream 100 bases:

>100_bases
CACAAAAAGCCGGACCTAAACATACCCGCGAACAGGCCGTTATTCGTTGAGGGTATGTAGATAACGCACAAGAACGACGC
CCGCGGCGCGGAGAACAACC

Downstream 100 bases:

>100_bases
GGACCGGTTCGACGCTTTCGATCTGCCAGCGCAGCGATGTCACTTTCGGATGCCGGCACTCTGGCGGCAGGACTTGCAGG
CGGCCTTCTCGGCAACAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSGVGAGAAGSKSAIPPMGLGPS
EDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVPAVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGT
SLYNFRTRVLASHSHPMPHLHLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK
GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMALVYRLQLRKG

Sequences:

>Translated_309_residues
MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSGVGAGAAGSKSAIPPMGLGPS
EDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVPAVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGT
SLYNFRTRVLASHSHPMPHLHLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK
GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMALVYRLQLRKG
>Mature_309_residues
MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSGVGAGAAGSKSAIPPMGLGPS
EDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVPAVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGT
SLYNFRTRVLASHSHPMPHLHLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK
GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMALVYRLQLRKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33146; Mature: 33146

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSG
CCCCCEEEEEHHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
VGAGAAGSKSAIPPMGLGPSEDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVP
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCCCCCCEEEECHHHHHHHHHHH
AVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGTSLYNFRTRVLASHSHPMPHL
HHHHHHHCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCEEEHHHHHEEECCCCCCCEE
HLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK
EECCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCC
GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMAL
CCCEEEEEEEEECCCHHHHHHHHHEEEECCCCCCCCEEEEEEEEEHHHCCCCCHHHHHHH
VYRLQLRKG
HHHHHHCCC
>Mature Secondary Structure
MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSG
CCCCCEEEEEHHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
VGAGAAGSKSAIPPMGLGPSEDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVP
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCCCCCCEEEECHHHHHHHHHHH
AVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGTSLYNFRTRVLASHSHPMPHL
HHHHHHHCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCEEEHHHHHEEECCCCCCCEE
HLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK
EECCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCC
GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMAL
CCCEEEEEEEEECCCHHHHHHHHHEEEECCCCCCCCEEEEEEEEEHHHCCCCCHHHHHHH
VYRLQLRKG
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA