| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317975
Identifier: 74317975
GI number: 74317975
Start: 2051115
End: 2052044
Strand: Reverse
Name: 74317975
Synonym: Tbd_1957
Alternate gene names: NA
Gene position: 2052044-2051115 (Counterclockwise)
Preceding gene: 74317977
Following gene: 74317973
Centisome position: 70.52
GC content: 63.23
Gene sequence:
>930_bases ATGGACAACCCAAGAAGCATTCGAGTGCATGCCTCGGAGCTCGAGGTCGGCAGGCCTTTGTCTTGGGCCGTCTACGACGA AAACGGCGTGCTGCTACTCAACAAAGGGATGGCACCTGCCACCGAGGCACAAATCATTGCGATGCTTCAGCGGGGAGTAT TCCGACAGCCCGGCTCCGGCGTTGGCGCCGGGGCCGCGGGATCCAAATCCGCCATTCCGCCGATGGGTCTGGGGCCGTCC GAGGACGAGAGCAAGACCAGGCTCACGGGCGACCCGATCCCGTTCGACGATCTTGCGATGCAGCCCGGCGAGGTTCTGCA GCTGCATCCTGCTCTCGAAGTAGTGGCGGCAGACGTGCCGGCGGTGCTGATCGGTTATCTCAAGGACCGGGCCATCGTGG TGGCCACGCCGATGGTGTCCGGCAAGCCCTTGCTGGTGAAGGACGGCACGCTCTTCAATATCAAGACATTTTCCGGGACG AGCCTATACAACTTCCGCACCCGCGTGCTGGCCTCGCATTCCCATCCGATGCCGCACCTTCACCTTGAGTATCCCCGGCT GGTCTGCCAGACCAAGATCAGGAAGGCGCTGCGCGCCCTCACGGATCTGCCGGCCACGCTGCTGAACCCGGCGAGCGGCG ACAGCCGCGACGTCGTTTTGAAAGACCTGAGCGTAGGCGGCGCCAAGATCGTGCTGCCTGAGCCCGTGACATGCGCCAAG GGCGATCCGTTCGTGGTCGGCTTCAGGATCAAGATCGGCGACGACCTCGAAGAGGCGATCCGCGCGGATGCCGTGATGTG TTCCGCCGAGTCGCGCACGGGGAAGGAAACGACGGTCCATACGATGAGCGTGCAGTTCAAGGAACTGCCCAAGTCGACCA GCCTCGCGATCATGGCGCTGGTGTACCGGCTGCAGTTGCGTAAGGGCTGA
Upstream 100 bases:
>100_bases CACAAAAAGCCGGACCTAAACATACCCGCGAACAGGCCGTTATTCGTTGAGGGTATGTAGATAACGCACAAGAACGACGC CCGCGGCGCGGAGAACAACC
Downstream 100 bases:
>100_bases GGACCGGTTCGACGCTTTCGATCTGCCAGCGCAGCGATGTCACTTTCGGATGCCGGCACTCTGGCGGCAGGACTTGCAGG CGGCCTTCTCGGCAACAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSGVGAGAAGSKSAIPPMGLGPS EDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVPAVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGT SLYNFRTRVLASHSHPMPHLHLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMALVYRLQLRKG
Sequences:
>Translated_309_residues MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSGVGAGAAGSKSAIPPMGLGPS EDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVPAVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGT SLYNFRTRVLASHSHPMPHLHLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMALVYRLQLRKG >Mature_309_residues MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSGVGAGAAGSKSAIPPMGLGPS EDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVPAVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGT SLYNFRTRVLASHSHPMPHLHLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMALVYRLQLRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33146; Mature: 33146
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSG CCCCCEEEEEHHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC VGAGAAGSKSAIPPMGLGPSEDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVP CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCCCCCCEEEECHHHHHHHHHHH AVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGTSLYNFRTRVLASHSHPMPHL HHHHHHHCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCEEEHHHHHEEECCCCCCCEE HLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK EECCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCC GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMAL CCCEEEEEEEEECCCHHHHHHHHHEEEECCCCCCCCEEEEEEEEEHHHCCCCCHHHHHHH VYRLQLRKG HHHHHHCCC >Mature Secondary Structure MDNPRSIRVHASELEVGRPLSWAVYDENGVLLLNKGMAPATEAQIIAMLQRGVFRQPGSG CCCCCEEEEEHHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC VGAGAAGSKSAIPPMGLGPSEDESKTRLTGDPIPFDDLAMQPGEVLQLHPALEVVAADVP CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCCCCCCEEEECHHHHHHHHHHH AVLIGYLKDRAIVVATPMVSGKPLLVKDGTLFNIKTFSGTSLYNFRTRVLASHSHPMPHL HHHHHHHCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCEEEHHHHHEEECCCCCCCEE HLEYPRLVCQTKIRKALRALTDLPATLLNPASGDSRDVVLKDLSVGGAKIVLPEPVTCAK EECCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCC GDPFVVGFRIKIGDDLEEAIRADAVMCSAESRTGKETTVHTMSVQFKELPKSTSLAIMAL CCCEEEEEEEEECCCHHHHHHHHHEEEECCCCCCCCEEEEEEEEEHHHCCCCCHHHHHHH VYRLQLRKG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA