Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317974

Identifier: 74317974

GI number: 74317974

Start: 2050469

End: 2051014

Strand: Direct

Name: 74317974

Synonym: Tbd_1956

Alternate gene names: NA

Gene position: 2050469-2051014 (Clockwise)

Preceding gene: 74317970

Following gene: 74317976

Centisome position: 70.47

GC content: 64.47

Gene sequence:

>546_bases
ATGAACGAGGACGAGAAGAACGCGCTGGTCGCCGAGCTGAAGCACGGGATACCGGGTCTGGTCAGCGCACATCTGGCGGA
AGCGTCGACCCGGCAGAAAGTCGCCGATGCCGTCGAGGCGATCCTGACCGGCAACCGCTCGCCGGACGACCCCTACCGGA
CAACCATCCACTTCCTGGCGGGCCTCCTCACTTTCTGCCTCGGGGTCATCGCCGCCATTTTCAGCGTTCTGAGCGACAGC
AACACCGACCCGTATCGGCTGAGCTACAGAATGCTGGGCGGCGTGCTGGCGTCGATCGCATTCGTCGCCTGGCTATGCAC
GGTCGCCGTTGCATTCGTTCAAACGGAGAAATACAGGCGTCGATCGGGGCGCCGCTACCGGGCGCCGCCGGTCTTCCTGC
GCGCCGCACTGATGCTCGCGCTAACCCTCTTGGGCGGCGTGCCGGTCGCCTACTGCGTCCGCTATGGACACGCGATCCTC
ACCGGACTCGATGAACCGGTCGGGCTTTTGGATTCCTTGATCGGGGTGTGGACGCTCGCGTTCTGA

Upstream 100 bases:

>100_bases
TTGGTGCGGTCCGCCGCGACGCCACTCGCCTCACTGTCCGTGGTATCTACAATGGTCAGCACGGCTCGCGCCCGTCGACA
CTGAAGCGAAAGGAAGCGCC

Downstream 100 bases:

>100_bases
GGCTGTTGCCGAGAAGGCCGCCTGCAAGTCCTGCCGCCAGAGTGCCGGCATCCGAAAGTGACATCGCTGCGCTGGCAGAT
CGAAAGCGTCGAACCGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNEDEKNALVAELKHGIPGLVSAHLAEASTRQKVADAVEAILTGNRSPDDPYRTTIHFLAGLLTFCLGVIAAIFSVLSDS
NTDPYRLSYRMLGGVLASIAFVAWLCTVAVAFVQTEKYRRRSGRRYRAPPVFLRAALMLALTLLGGVPVAYCVRYGHAIL
TGLDEPVGLLDSLIGVWTLAF

Sequences:

>Translated_181_residues
MNEDEKNALVAELKHGIPGLVSAHLAEASTRQKVADAVEAILTGNRSPDDPYRTTIHFLAGLLTFCLGVIAAIFSVLSDS
NTDPYRLSYRMLGGVLASIAFVAWLCTVAVAFVQTEKYRRRSGRRYRAPPVFLRAALMLALTLLGGVPVAYCVRYGHAIL
TGLDEPVGLLDSLIGVWTLAF
>Mature_181_residues
MNEDEKNALVAELKHGIPGLVSAHLAEASTRQKVADAVEAILTGNRSPDDPYRTTIHFLAGLLTFCLGVIAAIFSVLSDS
NTDPYRLSYRMLGGVLASIAFVAWLCTVAVAFVQTEKYRRRSGRRYRAPPVFLRAALMLALTLLGGVPVAYCVRYGHAIL
TGLDEPVGLLDSLIGVWTLAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19621; Mature: 19621

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDEKNALVAELKHGIPGLVSAHLAEASTRQKVADAVEAILTGNRSPDDPYRTTIHFLA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GLLTFCLGVIAAIFSVLSDSNTDPYRLSYRMLGGVLASIAFVAWLCTVAVAFVQTEKYRR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSGRRYRAPPVFLRAALMLALTLLGGVPVAYCVRYGHAILTGLDEPVGLLDSLIGVWTLA
HCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
F
C
>Mature Secondary Structure
MNEDEKNALVAELKHGIPGLVSAHLAEASTRQKVADAVEAILTGNRSPDDPYRTTIHFLA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GLLTFCLGVIAAIFSVLSDSNTDPYRLSYRMLGGVLASIAFVAWLCTVAVAFVQTEKYRR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSGRRYRAPPVFLRAALMLALTLLGGVPVAYCVRYGHAILTGLDEPVGLLDSLIGVWTLA
HCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA