| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317976
Identifier: 74317976
GI number: 74317976
Start: 2052544
End: 2053458
Strand: Direct
Name: 74317976
Synonym: Tbd_1958
Alternate gene names: NA
Gene position: 2052544-2053458 (Clockwise)
Preceding gene: 74317974
Following gene: 74317988
Centisome position: 70.54
GC content: 57.49
Gene sequence:
>915_bases ATGAATAAATTTATAGAGATCCTGGGCGGCGGGGTTCTTGCGCTGTCCTCGGTGTGCGCCCACGCGGAAATATCCTATTT TCCCGACGCGGTTTTCGATAGCGAAAGCGGTTTGTATTGGCGCCTTTTTGAAACACTTGAGCAAGGGGAGGCGGCCGGCT TTAGCTGGGCTTCGGTGGATCAGACGGCGGATTTATTTCTTCATTACGCGCCGCCCGACGCCAATGGCACGCTTCCGGGT TATGACCCGGACTGGGGTGGCATTCTCAGTTACACGACAAGCGGGGACGGGATGTCCTACTCGTTTACCTGGGAGTCGAG CTACGATTACGACAACTATCTGCCACCCCTACTTTCGGATCCACTCGGATATAGCATTTCTTACGGAACTCCTGGACCGC ACTCTCCCATGACCGACGCCTTGCTAGCTCAGGTATCGGGCGACAACCAAGAAGCTGTTACTGTGCTTCTCCGGGACGTC ACACAAGCCGATCAATACGGTTGGATCGCTGGAGAGGTCGAAGGAATCATCGACCCGCCCTCGCAAAGCATCGACGATTG CCCTTGTCCTTTTTACGATGAGCGCACCGCCGCGATTACGATGGTCGACTATTACAACGACGATGGCTCTCTCAATATCG CCGGGTACCTGATGGTCAGCAGTGTGCCTGAGCCCACTCCCCCCGCCCTCTTTCTTGCGGGAATCGCTGGCATAGCGTTG CGTCGCAAACTCACACAGGTCTGCGCCCCCCGACTGGGCCGTGGTAAGGGATGCGGTCACGCACGCCATGCGTGCCGCAC CGCAGGCTTTCGCCTCGGCAATGCCAGAGCCGATCTCGAAGTTCGCCTGGACGCGAGCCGGTCTGAAACCCGACTCAGCG GATCGGAATGGTCACGAACATCGCGGTCGTATTGA
Upstream 100 bases:
>100_bases CTTGCCTCCCCGGCAGAGAGAGGATTTAGCGGCGCCAGGGGCCTACCGTCAATCAACCCGACACATTTCACCGACTTGGC TTCTTAACAAAGGAGGGGGT
Downstream 100 bases:
>100_bases CCGAGTTGAAGTCGCTCACCTTGGGGAAATGGGTGAAATTCACCGTCACGTGGTCGAAGCGCACCGCAAGCAGCGGGATC GGCGCGATGAAGGCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVDQTADLFLHYAPPDANGTLPG YDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSDPLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDV TQADQYGWIAGEVEGIIDPPSQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRTSRSY
Sequences:
>Translated_304_residues MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVDQTADLFLHYAPPDANGTLPG YDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSDPLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDV TQADQYGWIAGEVEGIIDPPSQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRTSRSY >Mature_304_residues MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVDQTADLFLHYAPPDANGTLPG YDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSDPLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDV TQADQYGWIAGEVEGIIDPPSQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRTSRSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32935; Mature: 32935
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVD CCHHHHHHCCHHHHHHHHHHHCCHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCHHCCC QTADLFLHYAPPDANGTLPGYDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSD CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHHCC PLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDVTQADQYGWIAGEVEGIIDPP CCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEECCC SQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL CCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHH RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRT HHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEECCCCCCEEEEEECCCCHHHCCCCHHCHH SRSY CCCC >Mature Secondary Structure MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVD CCHHHHHHCCHHHHHHHHHHHCCHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCHHCCC QTADLFLHYAPPDANGTLPGYDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSD CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHHCC PLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDVTQADQYGWIAGEVEGIIDPP CCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEECCC SQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL CCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHH RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRT HHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEECCCCCCEEEEEECCCCHHHCCCCHHCHH SRSY CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA