Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317972

Identifier: 74317972

GI number: 74317972

Start: 2048241

End: 2048792

Strand: Reverse

Name: 74317972

Synonym: Tbd_1954

Alternate gene names: NA

Gene position: 2048792-2048241 (Counterclockwise)

Preceding gene: 74317973

Following gene: 74317971

Centisome position: 70.41

GC content: 60.33

Gene sequence:

>552_bases
ATGAACAAGAAATTGACGTTGACCGTGGCCGCTGCGCTCGTTCTCGCAGGATGTGCCTCGGGGGTGACGCGTACGCCTAG
CGCTGCGGTCCCGCTTCAGCAGGCGAATGCACCCGCTTATACGCAGTTCGCTTCGGTGACGCTGTCGATGACGCCAGATG
CCAAGGCGAAGGCGCTCGACAACCTTAAATTCAATCCCGACCAGTTGCTCGATCACGTACGCCGGGCGCTGGAAGCTAAG
TCGCTGATCGTTGCGAACGATGCGGCCTTGCCCAAGGTCGAGATCGTGGTTACAAGCATGCGCGTGCGCTCGAATTTCTC
AGCGGTGATGTGGGGCTTCATGGCGGGCGCGGACTCCATCGAAGGCGATATCGTGCTGACCGACACGAGCGGCAAGGAAT
TGGATCGTTTCGTCGTATCCGCGTCCTACGCACTGGGTGGCTTGGCCGGCGGTCAGGACGATGCGCGGATGGGCTGGTTG
TACGAGAAATTCGCCCAAGAGGCAGTCAATGAACTTGCCAAGCAGCAGCCCGCGATGGTGTCGCAGCGCTGA

Upstream 100 bases:

>100_bases
GCGCAAGCGCTCGTCGATCCCCGTTTTTCATCGGGCGCGCGGTTAACCGGACCCGTTCTTGAATTAGACGTTTTATATCC
AACCAGGGAGGAGATTCATC

Downstream 100 bases:

>100_bases
GTGGAACCGAGAGGCGGCTGGTTCTTTCGTCCGAGCGGGTCGCCTCGGGTAATTGATTGGTTTCCGGCCTAGGACATCCA
TGGCAAGGGCCCCGGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNKKLTLTVAAALVLAGCASGVTRTPSAAVPLQQANAPAYTQFASVTLSMTPDAKAKALDNLKFNPDQLLDHVRRALEAK
SLIVANDAALPKVEIVVTSMRVRSNFSAVMWGFMAGADSIEGDIVLTDTSGKELDRFVVSASYALGGLAGGQDDARMGWL
YEKFAQEAVNELAKQQPAMVSQR

Sequences:

>Translated_183_residues
MNKKLTLTVAAALVLAGCASGVTRTPSAAVPLQQANAPAYTQFASVTLSMTPDAKAKALDNLKFNPDQLLDHVRRALEAK
SLIVANDAALPKVEIVVTSMRVRSNFSAVMWGFMAGADSIEGDIVLTDTSGKELDRFVVSASYALGGLAGGQDDARMGWL
YEKFAQEAVNELAKQQPAMVSQR
>Mature_183_residues
MNKKLTLTVAAALVLAGCASGVTRTPSAAVPLQQANAPAYTQFASVTLSMTPDAKAKALDNLKFNPDQLLDHVRRALEAK
SLIVANDAALPKVEIVVTSMRVRSNFSAVMWGFMAGADSIEGDIVLTDTSGKELDRFVVSASYALGGLAGGQDDARMGWL
YEKFAQEAVNELAKQQPAMVSQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19445; Mature: 19445

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLTLTVAAALVLAGCASGVTRTPSAAVPLQQANAPAYTQFASVTLSMTPDAKAKALD
CCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHEEEEEEEECCCHHHHHHH
NLKFNPDQLLDHVRRALEAKSLIVANDAALPKVEIVVTSMRVRSNFSAVMWGFMAGADSI
CCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEHHHHHCCHHHHHHHHHHCCCCC
EGDIVLTDTSGKELDRFVVSASYALGGLAGGQDDARMGWLYEKFAQEAVNELAKQQPAMV
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SQR
CCC
>Mature Secondary Structure
MNKKLTLTVAAALVLAGCASGVTRTPSAAVPLQQANAPAYTQFASVTLSMTPDAKAKALD
CCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHEEEEEEEECCCHHHHHHH
NLKFNPDQLLDHVRRALEAKSLIVANDAALPKVEIVVTSMRVRSNFSAVMWGFMAGADSI
CCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEHHHHHCCHHHHHHHHHHCCCCC
EGDIVLTDTSGKELDRFVVSASYALGGLAGGQDDARMGWLYEKFAQEAVNELAKQQPAMV
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SQR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA