Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is cbbP [H]

Identifier: 74317973

GI number: 74317973

Start: 2049151

End: 2050131

Strand: Reverse

Name: cbbP [H]

Synonym: Tbd_1955

Alternate gene names: 74317973

Gene position: 2050131-2049151 (Counterclockwise)

Preceding gene: 74317975

Following gene: 74317972

Centisome position: 70.46

GC content: 65.34

Gene sequence:

>981_bases
ATGTCCCGTCAGCACCCGATCGTCGCTGTCACCGGCTCGTCCGGTGCCGGCCTGTCCACGATACGCCACGCGTTCAAGTT
CATTTTCGAGCGCCTGAACATCAAACCCGCGCTCGTTCATGGCGACGGCTTCCGGCGGTATACCGACCGCCAGTTCACGG
CCTTGCTCGACGAGGCGCGGCGTAGCGGCCGCAAGATTTCCTGGTTCGGCCCGGAGTGCAATCATTTCCAGGAGCTCGAA
TCGTTTTTTCGTACCTACGGCGAATGCGGCAGCGGGGTGTATCGCCAGTACGCGCACAACGCCGAACACGGCGGGGAACT
CGGCGTGCCGGCGGGCGAGTTCACGCCCTGGGCGCCGCTGCCGCAAGGCAGCGATCTGCTGTTCTACGAGGGGCAGCACG
GCGGCCTGGTCGCCAACACCTGGACGCGCCGCAAGGTCGACGCGCGTCATTTTCCGCCCGGCATCGACCGCCGCGTCGGC
CGCCCCGGCATCGACGTAGCTCGGCACGTGGACCTGCTGATCGGCGTGGTGCCCGCGATCAACCTCGAGTGGATACAGAA
GATCCACCGCGACTGCAAGAACGGCTGCACGCCCGAAGAAGCGGTGGAAACGATCCTCCGCCGCATGGACGACTACATCC
ATTACATCGTCCCCCAGTTCGGCCTGACCGACATCAACATCCAGCGCATGCCGCTGGTCGACACCTCGGATCCCTTCATC
GCGCGCGACGTGCCCCTGCCCGACGAATCGCTGTGCGTGATCCATTTCCGCGACCGCGAGCGCCACGATTTTCGCGCCTT
GCTCAAGCGCATCCCCGACGCCTACATGTCGCGGCCGACCACGATGGTGGTGTCGAGCAACAATCTGCGCCTTGCGCTTG
CCGCGATTTGCAGCCCGATCCTGGCGGGTTTCATGGAAGCCCGCGGTCCCGCCGCGGCGGGATCAAGGGCGCCAGACCCG
TGCGTACCATCGGAGCTTTGA

Upstream 100 bases:

>100_bases
AGTCCGGCTCCGCCTTCGGCCGGATGCTCCTTCTTTGGGGGACGGAGGGGTAAACTTTCAGTCCCGCTGCCTTCCGGCCA
ACCTGGGGGAATGACCGACC

Downstream 100 bases:

>100_bases
AAATCGACGGACCTGCAGGTCGCGGTTGAGGGCCCCCCGGTCCGATCGCGGAAACGCTGCGATGGACGATTGCCCGCTAA
ACGCGATCCCGTTGTCCCCC

Product: phosphoribulokinase-like protein

Products: NA

Alternate protein names: PRK; PRKase; Phosphopentokinase [H]

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSRQHPIVAVTGSSGAGLSTIRHAFKFIFERLNIKPALVHGDGFRRYTDRQFTALLDEARRSGRKISWFGPECNHFQELE
SFFRTYGECGSGVYRQYAHNAEHGGELGVPAGEFTPWAPLPQGSDLLFYEGQHGGLVANTWTRRKVDARHFPPGIDRRVG
RPGIDVARHVDLLIGVVPAINLEWIQKIHRDCKNGCTPEEAVETILRRMDDYIHYIVPQFGLTDINIQRMPLVDTSDPFI
ARDVPLPDESLCVIHFRDRERHDFRALLKRIPDAYMSRPTTMVVSSNNLRLALAAICSPILAGFMEARGPAAAGSRAPDP
CVPSEL

Sequences:

>Translated_326_residues
MSRQHPIVAVTGSSGAGLSTIRHAFKFIFERLNIKPALVHGDGFRRYTDRQFTALLDEARRSGRKISWFGPECNHFQELE
SFFRTYGECGSGVYRQYAHNAEHGGELGVPAGEFTPWAPLPQGSDLLFYEGQHGGLVANTWTRRKVDARHFPPGIDRRVG
RPGIDVARHVDLLIGVVPAINLEWIQKIHRDCKNGCTPEEAVETILRRMDDYIHYIVPQFGLTDINIQRMPLVDTSDPFI
ARDVPLPDESLCVIHFRDRERHDFRALLKRIPDAYMSRPTTMVVSSNNLRLALAAICSPILAGFMEARGPAAAGSRAPDP
CVPSEL
>Mature_325_residues
SRQHPIVAVTGSSGAGLSTIRHAFKFIFERLNIKPALVHGDGFRRYTDRQFTALLDEARRSGRKISWFGPECNHFQELES
FFRTYGECGSGVYRQYAHNAEHGGELGVPAGEFTPWAPLPQGSDLLFYEGQHGGLVANTWTRRKVDARHFPPGIDRRVGR
PGIDVARHVDLLIGVVPAINLEWIQKIHRDCKNGCTPEEAVETILRRMDDYIHYIVPQFGLTDINIQRMPLVDTSDPFIA
RDVPLPDESLCVIHFRDRERHDFRALLKRIPDAYMSRPTTMVVSSNNLRLALAAICSPILAGFMEARGPAAAGSRAPDPC
VPSEL

Specific function: Unknown

COG id: COG3954

COG function: function code C; Phosphoribulokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI2367214, Length=309, Percent_Identity=44.336569579288, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006082
- InterPro:   IPR006083 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.19 [H]

Molecular weight: Translated: 36551; Mature: 36420

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQHPIVAVTGSSGAGLSTIRHAFKFIFERLNIKPALVHGDGFRRYTDRQFTALLDEAR
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
RSGRKISWFGPECNHFQELESFFRTYGECGSGVYRQYAHNAEHGGELGVPAGEFTPWAPL
HCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PQGSDLLFYEGQHGGLVANTWTRRKVDARHFPPGIDRRVGRPGIDVARHVDLLIGVVPAI
CCCCCEEEEECCCCCEEECCCHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCC
NLEWIQKIHRDCKNGCTPEEAVETILRRMDDYIHYIVPQFGLTDINIQRMPLVDTSDPFI
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCE
ARDVPLPDESLCVIHFRDRERHDFRALLKRIPDAYMSRPTTMVVSSNNLRLALAAICSPI
EECCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHCCCCEEEEECCCCCHHHHHHHHHH
LAGFMEARGPAAAGSRAPDPCVPSEL
HHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRQHPIVAVTGSSGAGLSTIRHAFKFIFERLNIKPALVHGDGFRRYTDRQFTALLDEAR
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
RSGRKISWFGPECNHFQELESFFRTYGECGSGVYRQYAHNAEHGGELGVPAGEFTPWAPL
HCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PQGSDLLFYEGQHGGLVANTWTRRKVDARHFPPGIDRRVGRPGIDVARHVDLLIGVVPAI
CCCCCEEEEECCCCCEEECCCHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCC
NLEWIQKIHRDCKNGCTPEEAVETILRRMDDYIHYIVPQFGLTDINIQRMPLVDTSDPFI
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCE
ARDVPLPDESLCVIHFRDRERHDFRALLKRIPDAYMSRPTTMVVSSNNLRLALAAICSPI
EECCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHCCCCEEEEECCCCCHHHHHHHHHH
LAGFMEARGPAAAGSRAPDPCVPSEL
HHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA