Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317967

Identifier: 74317967

GI number: 74317967

Start: 2043791

End: 2044315

Strand: Direct

Name: 74317967

Synonym: Tbd_1949

Alternate gene names: NA

Gene position: 2043791-2044315 (Clockwise)

Preceding gene: 74317965

Following gene: 74317970

Centisome position: 70.24

GC content: 64.76

Gene sequence:

>525_bases
ATGCCTCGCCCTACTTCTGACCGACCCAACCCGATCACCGAACAGAACATCGAGCATATCGTCCGGCTGCAGCGGCAGGC
CGACAAGAAGCGCTCGGGCGCCGAACGCCTCGCCGACCTCGTCGCCCGCGTCGCCGGCGGCTCGCCTTTCATCGTTTTTC
ACGCCCTCTGGTTCGGCGCGTGGATCGTGCTCAACCTCGGCGCGGTCCCGGCGATCCGGCCCTGGGACCCGTTTCCGTTC
GGCCTCCTGACGCTCGTGGTCTCGCTCGAAGCGATCTTTCTCTCGCTGCTGGTCCTGATGGCGCAGAACCGCTTGAGCCA
GGACGCCGACAGGCGCGCGCAGCTCGATCTCCAGATCAACATACTCGCCGAGCAGGAGAGCACCGCGACGCTGAAAATGC
TCGAGCAGATCTGTGAACACCTCGGCATCGACAACGCCGGCGAGGAGGAGCGCGAACTGGCGACCGCGACCGACGTCAGC
GAACTCGCGAAATCGCTCGACGACAAACTCACTTCGGAGAGCTGA

Upstream 100 bases:

>100_bases
AGGATTCCTACGCGGGAATGGGTTGAGGACCTATGGAGGCGACGCCGCCGAACGTGTATCAGGATAGCTATCTGCCCGCG
CGGGCCGTCCTGACCTCACC

Downstream 100 bases:

>100_bases
CGCGGCGAGGCCGACCTACGCCGCAGGCGATTTTCCTGCGCGGAAGACGGCGAGCAGCGCCGCCTTCAGCGTCGCGTCCG
CCTCCCAGTCGCGCGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MPRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGAWIVLNLGAVPAIRPWDPFPF
GLLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQINILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVS
ELAKSLDDKLTSES

Sequences:

>Translated_174_residues
MPRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGAWIVLNLGAVPAIRPWDPFPF
GLLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQINILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVS
ELAKSLDDKLTSES
>Mature_173_residues
PRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGAWIVLNLGAVPAIRPWDPFPFG
LLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQINILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVSE
LAKSLDDKLTSES

Specific function: Unknown

COG id: COG4420

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19307; Mature: 19176

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WIVLNLGAVPAIRPWDPFPFGLLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQIN
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
ILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVSELAKSLDDKLTSES
EEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WIVLNLGAVPAIRPWDPFPFGLLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQIN
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
ILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVSELAKSLDDKLTSES
EEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA