| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317967
Identifier: 74317967
GI number: 74317967
Start: 2043791
End: 2044315
Strand: Direct
Name: 74317967
Synonym: Tbd_1949
Alternate gene names: NA
Gene position: 2043791-2044315 (Clockwise)
Preceding gene: 74317965
Following gene: 74317970
Centisome position: 70.24
GC content: 64.76
Gene sequence:
>525_bases ATGCCTCGCCCTACTTCTGACCGACCCAACCCGATCACCGAACAGAACATCGAGCATATCGTCCGGCTGCAGCGGCAGGC CGACAAGAAGCGCTCGGGCGCCGAACGCCTCGCCGACCTCGTCGCCCGCGTCGCCGGCGGCTCGCCTTTCATCGTTTTTC ACGCCCTCTGGTTCGGCGCGTGGATCGTGCTCAACCTCGGCGCGGTCCCGGCGATCCGGCCCTGGGACCCGTTTCCGTTC GGCCTCCTGACGCTCGTGGTCTCGCTCGAAGCGATCTTTCTCTCGCTGCTGGTCCTGATGGCGCAGAACCGCTTGAGCCA GGACGCCGACAGGCGCGCGCAGCTCGATCTCCAGATCAACATACTCGCCGAGCAGGAGAGCACCGCGACGCTGAAAATGC TCGAGCAGATCTGTGAACACCTCGGCATCGACAACGCCGGCGAGGAGGAGCGCGAACTGGCGACCGCGACCGACGTCAGC GAACTCGCGAAATCGCTCGACGACAAACTCACTTCGGAGAGCTGA
Upstream 100 bases:
>100_bases AGGATTCCTACGCGGGAATGGGTTGAGGACCTATGGAGGCGACGCCGCCGAACGTGTATCAGGATAGCTATCTGCCCGCG CGGGCCGTCCTGACCTCACC
Downstream 100 bases:
>100_bases CGCGGCGAGGCCGACCTACGCCGCAGGCGATTTTCCTGCGCGGAAGACGGCGAGCAGCGCCGCCTTCAGCGTCGCGTCCG CCTCCCAGTCGCGCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MPRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGAWIVLNLGAVPAIRPWDPFPF GLLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQINILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVS ELAKSLDDKLTSES
Sequences:
>Translated_174_residues MPRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGAWIVLNLGAVPAIRPWDPFPF GLLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQINILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVS ELAKSLDDKLTSES >Mature_173_residues PRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGAWIVLNLGAVPAIRPWDPFPFG LLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQINILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVSE LAKSLDDKLTSES
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19307; Mature: 19176
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH WIVLNLGAVPAIRPWDPFPFGLLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQIN HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE ILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVSELAKSLDDKLTSES EEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PRPTSDRPNPITEQNIEHIVRLQRQADKKRSGAERLADLVARVAGGSPFIVFHALWFGA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH WIVLNLGAVPAIRPWDPFPFGLLTLVVSLEAIFLSLLVLMAQNRLSQDADRRAQLDLQIN HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE ILAEQESTATLKMLEQICEHLGIDNAGEEERELATATDVSELAKSLDDKLTSES EEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA