| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317965
Identifier: 74317965
GI number: 74317965
Start: 2041829
End: 2042845
Strand: Direct
Name: 74317965
Synonym: Tbd_1947
Alternate gene names: NA
Gene position: 2041829-2042845 (Clockwise)
Preceding gene: 74317964
Following gene: 74317967
Centisome position: 70.17
GC content: 69.52
Gene sequence:
>1017_bases ATGCAGCCCATCGCCACCCCGCACCTGCAGTCGATACTGCTTGCCTGCGCGATCGCCGTAGCCTTCCCCGCCGTTGCGGA AGACGCGACGACGACAAGCAACACGAGCACGACCGGCACGACCACGACGTCGAGCACGACGACCGCTACCTCCGCCATCG GCAGCTCGGCGACGACCGAGGCGAAACTCGCCGCCGAATTCGCCGATTTCCTCGGTGGCGAGACGCAGGCGAAGAGCGTG GTCTCGAGCCTGCGCCAGGGCACGTACAACGCGGATGCGGAATCGTCGACCGCCCCGGCCACCACGACTTCGTCAACGTC GACGACGGGGACGACGGGCAGCACGACGGGGACGACGACCGGCAACACGGGCACAACGGCGACGGCGACCAGCGGGTCGA CGGGCACGATGGGTTATGGCGAAGTGCGCATGACCTTGCGCCTCGCGCAAGCGCAGCTTGACCAGATGGGCATCACGCAA CCGACGGACGCGGAACTGGCCGCAGTCCTGCAGGGCGGCGAAGTCGGCGGCACCCAGGTCGATGGCATCCTCGCGCTGCG CGCCGACGGCATGGGCTGGGGCCAGATCGCGCAAAAATCCGGGATGACCGTCGGTCAACTGATGGGCAAAGCGCCGGCCA AGACGGCCACGGTGACGACGAGCGCGAGCGCTAGCAAGGCCGGCAAGCCTTCCGCTACGACGACAACGCGCTCGGCGTCT GCGCCCCAGGCGCGCGCGAACGGCTACATTCCGAGTTCGCCGAAGGCCGGCTCGACACAGGCCCGTTCCAACGGCTATAT CCCGAGCGGCAAATCGAACGGGGCGGGCATCGTCAGCGGCGCGGGCGACCGCATGACCGCCGCTGCCGGCGTGAACCGCG GACAGACGCACAAGGCGGGCGCCAACGTCCAGAGCGGCGGAGGGAGCGTCTCGGCCGGCGGTCGTCTGGTCTCGATGGGC GGCGGGAGCCGCGCCGGCGCGTCGGTCGACAACCCGGGCCACGCACGCAAGAACTGA
Upstream 100 bases:
>100_bases TTGCCAGTAACGGCCTGCTGAAGGACAGTGCCACCGCGCAGGAAATCATGCTTCAAACTGAACGGGTTCTTTCCAAGGGA TAACAGAGAGGAGACAGACC
Downstream 100 bases:
>100_bases GCTTCGTTCCCGGCCCTTCCGCGGCCGGGCCGCCCTCCCTTCCTCTGGCCGACGACGCTCGGCCCCCTCGCGAACCCGGG ATTCGTTCCGGGTCCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTEAKLAAEFADFLGGETQAKSV VSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTTGNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQ PTDAELAAVLQGGEVGGTQVDGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAGANVQSGGGSVSAGGRLVSMG GGSRAGASVDNPGHARKN
Sequences:
>Translated_338_residues MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTEAKLAAEFADFLGGETQAKSV VSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTTGNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQ PTDAELAAVLQGGEVGGTQVDGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAGANVQSGGGSVSAGGRLVSMG GGSRAGASVDNPGHARKN >Mature_338_residues MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTEAKLAAEFADFLGGETQAKSV VSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTTGNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQ PTDAELAAVLQGGEVGGTQVDGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAGANVQSGGGSVSAGGRLVSMG GGSRAGASVDNPGHARKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32881; Mature: 32881
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHH AKLAAEFADFLGGETQAKSVVSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTT HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQPTDAELAAVLQGGEVGGTQV CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEE DGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS CEEEEEEECCCCHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAG CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEHHHCCCCCCCCCCC ANVQSGGGSVSAGGRLVSMGGGSRAGASVDNPGHARKN CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHH AKLAAEFADFLGGETQAKSVVSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTT HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQPTDAELAAVLQGGEVGGTQV CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEE DGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS CEEEEEEECCCCHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAG CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEHHHCCCCCCCCCCC ANVQSGGGSVSAGGRLVSMGGGSRAGASVDNPGHARKN CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA