Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317965

Identifier: 74317965

GI number: 74317965

Start: 2041829

End: 2042845

Strand: Direct

Name: 74317965

Synonym: Tbd_1947

Alternate gene names: NA

Gene position: 2041829-2042845 (Clockwise)

Preceding gene: 74317964

Following gene: 74317967

Centisome position: 70.17

GC content: 69.52

Gene sequence:

>1017_bases
ATGCAGCCCATCGCCACCCCGCACCTGCAGTCGATACTGCTTGCCTGCGCGATCGCCGTAGCCTTCCCCGCCGTTGCGGA
AGACGCGACGACGACAAGCAACACGAGCACGACCGGCACGACCACGACGTCGAGCACGACGACCGCTACCTCCGCCATCG
GCAGCTCGGCGACGACCGAGGCGAAACTCGCCGCCGAATTCGCCGATTTCCTCGGTGGCGAGACGCAGGCGAAGAGCGTG
GTCTCGAGCCTGCGCCAGGGCACGTACAACGCGGATGCGGAATCGTCGACCGCCCCGGCCACCACGACTTCGTCAACGTC
GACGACGGGGACGACGGGCAGCACGACGGGGACGACGACCGGCAACACGGGCACAACGGCGACGGCGACCAGCGGGTCGA
CGGGCACGATGGGTTATGGCGAAGTGCGCATGACCTTGCGCCTCGCGCAAGCGCAGCTTGACCAGATGGGCATCACGCAA
CCGACGGACGCGGAACTGGCCGCAGTCCTGCAGGGCGGCGAAGTCGGCGGCACCCAGGTCGATGGCATCCTCGCGCTGCG
CGCCGACGGCATGGGCTGGGGCCAGATCGCGCAAAAATCCGGGATGACCGTCGGTCAACTGATGGGCAAAGCGCCGGCCA
AGACGGCCACGGTGACGACGAGCGCGAGCGCTAGCAAGGCCGGCAAGCCTTCCGCTACGACGACAACGCGCTCGGCGTCT
GCGCCCCAGGCGCGCGCGAACGGCTACATTCCGAGTTCGCCGAAGGCCGGCTCGACACAGGCCCGTTCCAACGGCTATAT
CCCGAGCGGCAAATCGAACGGGGCGGGCATCGTCAGCGGCGCGGGCGACCGCATGACCGCCGCTGCCGGCGTGAACCGCG
GACAGACGCACAAGGCGGGCGCCAACGTCCAGAGCGGCGGAGGGAGCGTCTCGGCCGGCGGTCGTCTGGTCTCGATGGGC
GGCGGGAGCCGCGCCGGCGCGTCGGTCGACAACCCGGGCCACGCACGCAAGAACTGA

Upstream 100 bases:

>100_bases
TTGCCAGTAACGGCCTGCTGAAGGACAGTGCCACCGCGCAGGAAATCATGCTTCAAACTGAACGGGTTCTTTCCAAGGGA
TAACAGAGAGGAGACAGACC

Downstream 100 bases:

>100_bases
GCTTCGTTCCCGGCCCTTCCGCGGCCGGGCCGCCCTCCCTTCCTCTGGCCGACGACGCTCGGCCCCCTCGCGAACCCGGG
ATTCGTTCCGGGTCCGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTEAKLAAEFADFLGGETQAKSV
VSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTTGNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQ
PTDAELAAVLQGGEVGGTQVDGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS
APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAGANVQSGGGSVSAGGRLVSMG
GGSRAGASVDNPGHARKN

Sequences:

>Translated_338_residues
MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTEAKLAAEFADFLGGETQAKSV
VSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTTGNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQ
PTDAELAAVLQGGEVGGTQVDGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS
APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAGANVQSGGGSVSAGGRLVSMG
GGSRAGASVDNPGHARKN
>Mature_338_residues
MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTEAKLAAEFADFLGGETQAKSV
VSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTTGNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQ
PTDAELAAVLQGGEVGGTQVDGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS
APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAGANVQSGGGSVSAGGRLVSMG
GGSRAGASVDNPGHARKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32881; Mature: 32881

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHH
AKLAAEFADFLGGETQAKSVVSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTT
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQPTDAELAAVLQGGEVGGTQV
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEE
DGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS
CEEEEEEECCCCHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAG
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEHHHCCCCCCCCCCC
ANVQSGGGSVSAGGRLVSMGGGSRAGASVDNPGHARKN
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPIATPHLQSILLACAIAVAFPAVAEDATTTSNTSTTGTTTTSSTTTATSAIGSSATTE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHH
AKLAAEFADFLGGETQAKSVVSSLRQGTYNADAESSTAPATTTSSTSTTGTTGSTTGTTT
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GNTGTTATATSGSTGTMGYGEVRMTLRLAQAQLDQMGITQPTDAELAAVLQGGEVGGTQV
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEE
DGILALRADGMGWGQIAQKSGMTVGQLMGKAPAKTATVTTSASASKAGKPSATTTTRSAS
CEEEEEEECCCCHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
APQARANGYIPSSPKAGSTQARSNGYIPSGKSNGAGIVSGAGDRMTAAAGVNRGQTHKAG
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEHHHCCCCCCCCCCC
ANVQSGGGSVSAGGRLVSMGGGSRAGASVDNPGHARKN
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA