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The map label for this gene is hcaT [H]

Identifier: 74317941

GI number: 74317941

Start: 2020198

End: 2021358

Strand: Reverse

Name: hcaT [H]

Synonym: Tbd_1923

Alternate gene names: 74317941

Gene position: 2021358-2020198 (Counterclockwise)

Preceding gene: 74317942

Following gene: 74317940

Centisome position: 69.47

GC content: 65.98

Gene sequence:

>1161_bases
ATGAATGCCGTCCCCTACTGGCGCCTGTCCGGTTTCTACTTCTTCTACTTCGCTTTCGTCGGCGCGATGTCGCCGTTCTG
GGGCCTCTACCTGAAGTCGCTCGCGTTCGACGCGGTGCAGATCGGCGTGCTGATGTCGCTGTTGCAGGTGATGCGGATTT
TCGCGCCGAACATCTGGGGCCACGTTGCCGACCGCCTCGGCCGGCGCACGGCAATCGTGCAGGTCGCAGCGCTGGCCAGC
GTCGTCGTGTTCGCGGGCGTCTTCGTCGACGACGGCTTCTGGTGGCTGTTCGCCGTCATGGCGGGCTTGAGCTTTTTCTG
GAGCGCTTCGCTGCCACTGGTCGAGGCGATGACGCTCTCCCATCTCGGCGAGCGCGCCTCGGCCTACGGCCGCATCCGCC
TCTGGGGCTCGGTCGGCTTCATCCTGATGGTCGTCGGCCTGGGCTACGCCTTCGACCACGTCTCGATCGCCTGGCTGCCG
TGGGCGGTTCTCGTCGTGATGCTCGGGATACTGGCGTGCGCGCGCGTGATTCCCGAGGCCGTGATACCGCTGCACTCCCC
TGACCATCGTTCGGTATGGGACATCGTCAGGCGGCCGGAAGTCGCCTCGCTGCTCGCCGGCTGCATGCTCATGTCGGTGA
CCCACGGCCCGTATTACACGTTTTATTCGATCTATCTGGTCGACCACGGCTACGACAAGTCGACGGTCGGCTGGCTCTGG
GCGCTCGGCGTGGCCTGCGAGATCGGCATTTTTCTGCTCGTGCCGCGCATCTTCGCGCGCATGGCGCCGCCGCGTCTTCT
CCTGTTGAGCTTCGCGCTCGCGGTGCTGCGTTTCCTGCTGATTGCCTGGGGTGTCGAATCGGCCTGGCTCGTGTGGGGTG
CGCAAACCCTGCACGCCTTCACCTTCGGCACCTATCATGCGGCCGCGGTCGCGCTGATCCACCTGCATTTCCGCGGGCGT
TACCAAGCGCGCGGCCAGGCCTTGTACACGAGCCTGTCGTACGGCGTCGGCGGCACGATCGGCGGGCTCGCGAGCGGACT
GACCTGGGACGCGATCGGCTCGGCCTGGACCTTCACGCTCGCCGCCGCGAGCGCGGCCCTTGCCTGGCTCATTTACGCGC
TGTGGGGACAAACAAAACCCGTGCCAGCGCAGGCGCGATAA

Upstream 100 bases:

>100_bases
ATCCCGTCGCGCGACGCGCCGCGGCGAGCGGGGGCGGACGCACGGCAGAATTGAGCTGCGGCCGCGGCAGCGCCTCGCCA
CTCGGGGATAATGCGCCCGC

Downstream 100 bases:

>100_bases
ATGATTCATCCCGCTCAAGCTATGAAATAATCGCTGTTTTGCACGCTTCATCGCCCGATTCCGCATGGCTGGCCAAACCT
TATTCCAGAAGCTGTGGGAC

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNAVPYWRLSGFYFFYFAFVGAMSPFWGLYLKSLAFDAVQIGVLMSLLQVMRIFAPNIWGHVADRLGRRTAIVQVAALAS
VVVFAGVFVDDGFWWLFAVMAGLSFFWSASLPLVEAMTLSHLGERASAYGRIRLWGSVGFILMVVGLGYAFDHVSIAWLP
WAVLVVMLGILACARVIPEAVIPLHSPDHRSVWDIVRRPEVASLLAGCMLMSVTHGPYYTFYSIYLVDHGYDKSTVGWLW
ALGVACEIGIFLLVPRIFARMAPPRLLLLSFALAVLRFLLIAWGVESAWLVWGAQTLHAFTFGTYHAAAVALIHLHFRGR
YQARGQALYTSLSYGVGGTIGGLASGLTWDAIGSAWTFTLAAASAALAWLIYALWGQTKPVPAQAR

Sequences:

>Translated_386_residues
MNAVPYWRLSGFYFFYFAFVGAMSPFWGLYLKSLAFDAVQIGVLMSLLQVMRIFAPNIWGHVADRLGRRTAIVQVAALAS
VVVFAGVFVDDGFWWLFAVMAGLSFFWSASLPLVEAMTLSHLGERASAYGRIRLWGSVGFILMVVGLGYAFDHVSIAWLP
WAVLVVMLGILACARVIPEAVIPLHSPDHRSVWDIVRRPEVASLLAGCMLMSVTHGPYYTFYSIYLVDHGYDKSTVGWLW
ALGVACEIGIFLLVPRIFARMAPPRLLLLSFALAVLRFLLIAWGVESAWLVWGAQTLHAFTFGTYHAAAVALIHLHFRGR
YQARGQALYTSLSYGVGGTIGGLASGLTWDAIGSAWTFTLAAASAALAWLIYALWGQTKPVPAQAR
>Mature_386_residues
MNAVPYWRLSGFYFFYFAFVGAMSPFWGLYLKSLAFDAVQIGVLMSLLQVMRIFAPNIWGHVADRLGRRTAIVQVAALAS
VVVFAGVFVDDGFWWLFAVMAGLSFFWSASLPLVEAMTLSHLGERASAYGRIRLWGSVGFILMVVGLGYAFDHVSIAWLP
WAVLVVMLGILACARVIPEAVIPLHSPDHRSVWDIVRRPEVASLLAGCMLMSVTHGPYYTFYSIYLVDHGYDKSTVGWLW
ALGVACEIGIFLLVPRIFARMAPPRLLLLSFALAVLRFLLIAWGVESAWLVWGAQTLHAFTFGTYHAAAVALIHLHFRGR
YQARGQALYTSLSYGVGGTIGGLASGLTWDAIGSAWTFTLAAASAALAWLIYALWGQTKPVPAQAR

Specific function: Probable permease involved in the uptake of 3- phenylpropionic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788886, Length=366, Percent_Identity=29.5081967213115, Blast_Score=114, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022814
- InterPro:   IPR016196
- InterPro:   IPR005276 [H]

Pfam domain/function: PF01306 LacY_symp [H]

EC number: NA

Molecular weight: Translated: 42480; Mature: 42480

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVPYWRLSGFYFFYFAFVGAMSPFWGLYLKSLAFDAVQIGVLMSLLQVMRIFAPNIWG
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
HVADRLGRRTAIVQVAALASVVVFAGVFVDDGFWWLFAVMAGLSFFWSASLPLVEAMTLS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HLGERASAYGRIRLWGSVGFILMVVGLGYAFDHVSIAWLPWAVLVVMLGILACARVIPEA
HHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIPLHSPDHRSVWDIVRRPEVASLLAGCMLMSVTHGPYYTFYSIYLVDHGYDKSTVGWLW
HCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHH
ALGVACEIGIFLLVPRIFARMAPPRLLLLSFALAVLRFLLIAWGVESAWLVWGAQTLHAF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TFGTYHAAAVALIHLHFRGRYQARGQALYTSLSYGVGGTIGGLASGLTWDAIGSAWTFTL
HHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHCCCCCCHHHHHCCCCHHHCCCHHHHHH
AAASAALAWLIYALWGQTKPVPAQAR
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNAVPYWRLSGFYFFYFAFVGAMSPFWGLYLKSLAFDAVQIGVLMSLLQVMRIFAPNIWG
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
HVADRLGRRTAIVQVAALASVVVFAGVFVDDGFWWLFAVMAGLSFFWSASLPLVEAMTLS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HLGERASAYGRIRLWGSVGFILMVVGLGYAFDHVSIAWLPWAVLVVMLGILACARVIPEA
HHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIPLHSPDHRSVWDIVRRPEVASLLAGCMLMSVTHGPYYTFYSIYLVDHGYDKSTVGWLW
HCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHH
ALGVACEIGIFLLVPRIFARMAPPRLLLLSFALAVLRFLLIAWGVESAWLVWGAQTLHAF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TFGTYHAAAVALIHLHFRGRYQARGQALYTSLSYGVGGTIGGLASGLTWDAIGSAWTFTL
HHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHCCCCCCHHHHHCCCCHHHCCCHHHHHH
AAASAALAWLIYALWGQTKPVPAQAR
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9603882; 9205837; 9278503 [H]