| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is folC [H]
Identifier: 74317929
GI number: 74317929
Start: 2006768
End: 2008036
Strand: Reverse
Name: folC [H]
Synonym: Tbd_1911
Alternate gene names: 74317929
Gene position: 2008036-2006768 (Counterclockwise)
Preceding gene: 74317930
Following gene: 74317928
Centisome position: 69.01
GC content: 69.98
Gene sequence:
>1269_bases TTGCCGCCTAGCGCATCGCTCGCCGCTTGGCTCGCCCGGCTCGAGACGCTGCATCCCAGCGCCATCGAACTGGGCCTCGA ACGCGTCCGACGCGTCAAGGACGCGATGGGATTGGCACCCGACTTCCCGCTCATCGTCGTCGGCGGCACCAACGGCAAGG GCTCGACCTGCGCCTATCTCGAGGCGGTTTTCGGCGCCGCCGGCTACAAGACCGGTCTCTATACCTCGCCCCACCTGCTG CGCTACAACGAGCGCGTCCGCATCGCGGGCAAGGAGGTCGACGACGCCGATCTGGTCGCCGCGTTTGAGGCCGTCGACCG GGCGCGCGGCGACGTCGCGCTGACCTATTTCGAATTCGGCACGCTTGCCGCTATGGCACAGTTCGTCGCCGCCAAGGTCG ACGTCGCGATCCTCGAAGTCGGCCTTGGTGGACGCCTCGACGCGGTCAACGTGTTCGACGCCGACGCCGCGATCGTGACC AGCGTCGACCTCGACCACATGGATTACCTCGGCGACACGCGCGAACAAATCGGATTCGAGAAGGCCGGTATCTACCGGGC CGGCCGGCCCGCGGTCTGCGCCGACCCCGAACCGCCTGCCAGCCTGCTTGCCCACGCCGGGAAAGTCGGCGCCGATCTGC GCCGGCTCGGCCGCGATTTCTCCGCCGCGCGTGCCGGGGAGCGCTGGACCTATCACAGCCGCGCGCTCAGTTGGCCGGAT CTGCCCTTGCCGGCCATGGCCGGGCCCTGCCAGTTGCGTAACGCCGCCGGTGCGCTCGCCGTCCTCGAGGCGCTACAGGC CCGGTTGCCGACCTCGTCCGAAGCGATCCGCCGAGGCGTCGCGGAAGCGCGCGTGGCCGGGCGCTTCCAGCGCATCGGGC GCAGGCCCGAGGTGATCGTCGACGTCGCACATAACCCCGAGGCGGCGCGTGCGCTGGCGTCGACGCTGCGCGAGCAGCCG ATCTCCGGGCGCACGCTCGCCGTCGTCGGAATGCTCGCCGACAAGGATGCCGGAGCGGTCGTCGCGGCGCTGGCCGACGG CGTCGACGCGTGGTGGACATGCACACCTGATTCCCCGCGGGCCCGCGACGCCAGCTCGCTGGCCGCGGTCCTGCACGCGC ACGGCGTGCGTAGCGTGAATGTGCAGCCGGGCGTGAAGGCGGCGCTTGCGGCGGCGCGAAGTGCAGCCGGTGAAGATGAT AGAATCCTCGTCTTCGGTTCGTTCTACACCGTCGCTGCAGTCCTCGATCATGCCGCCACCCAGCAGTAG
Upstream 100 bases:
>100_bases TTCCTGCAGGAGAAGGGCGCGGTCGATCGCATCATTGACCGCCGCCAGATGCGCGACGACCTGGCTGCCACGCTTGCGAT CATGATGGGACGCCCGGCGC
Downstream 100 bases:
>100_bases TGAAAATGAGCTCAGGCGCCGCGCCCGCCGGCGGCTGATCGGCGCGGTCGCGCTGACGCTCGTCGCGGTCATCGCGCTGC CGCTGCTGCTCGAAGACGAA
Product: folylpolyglutamate synthetase
Products: NA
Alternate protein names: Folylpolyglutamate synthase; Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase; Dihydrofolate synthase [H]
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MPPSASLAAWLARLETLHPSAIELGLERVRRVKDAMGLAPDFPLIVVGGTNGKGSTCAYLEAVFGAAGYKTGLYTSPHLL RYNERVRIAGKEVDDADLVAAFEAVDRARGDVALTYFEFGTLAAMAQFVAAKVDVAILEVGLGGRLDAVNVFDADAAIVT SVDLDHMDYLGDTREQIGFEKAGIYRAGRPAVCADPEPPASLLAHAGKVGADLRRLGRDFSAARAGERWTYHSRALSWPD LPLPAMAGPCQLRNAAGALAVLEALQARLPTSSEAIRRGVAEARVAGRFQRIGRRPEVIVDVAHNPEAARALASTLREQP ISGRTLAVVGMLADKDAGAVVAALADGVDAWWTCTPDSPRARDASSLAAVLHAHGVRSVNVQPGVKAALAAARSAAGEDD RILVFGSFYTVAAVLDHAATQQ
Sequences:
>Translated_422_residues MPPSASLAAWLARLETLHPSAIELGLERVRRVKDAMGLAPDFPLIVVGGTNGKGSTCAYLEAVFGAAGYKTGLYTSPHLL RYNERVRIAGKEVDDADLVAAFEAVDRARGDVALTYFEFGTLAAMAQFVAAKVDVAILEVGLGGRLDAVNVFDADAAIVT SVDLDHMDYLGDTREQIGFEKAGIYRAGRPAVCADPEPPASLLAHAGKVGADLRRLGRDFSAARAGERWTYHSRALSWPD LPLPAMAGPCQLRNAAGALAVLEALQARLPTSSEAIRRGVAEARVAGRFQRIGRRPEVIVDVAHNPEAARALASTLREQP ISGRTLAVVGMLADKDAGAVVAALADGVDAWWTCTPDSPRARDASSLAAVLHAHGVRSVNVQPGVKAALAAARSAAGEDD RILVFGSFYTVAAVLDHAATQQ >Mature_421_residues PPSASLAAWLARLETLHPSAIELGLERVRRVKDAMGLAPDFPLIVVGGTNGKGSTCAYLEAVFGAAGYKTGLYTSPHLLR YNERVRIAGKEVDDADLVAAFEAVDRARGDVALTYFEFGTLAAMAQFVAAKVDVAILEVGLGGRLDAVNVFDADAAIVTS VDLDHMDYLGDTREQIGFEKAGIYRAGRPAVCADPEPPASLLAHAGKVGADLRRLGRDFSAARAGERWTYHSRALSWPDL PLPAMAGPCQLRNAAGALAVLEALQARLPTSSEAIRRGVAEARVAGRFQRIGRRPEVIVDVAHNPEAARALASTLREQPI SGRTLAVVGMLADKDAGAVVAALADGVDAWWTCTPDSPRARDASSLAAVLHAHGVRSVNVQPGVKAALAAARSAAGEDDR ILVFGSFYTVAAVLDHAATQQ
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=169, Percent_Identity=37.8698224852071, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI66932990, Length=169, Percent_Identity=37.8698224852071, Blast_Score=122, Evalue=4e-28, Organism=Escherichia coli, GI1788654, Length=417, Percent_Identity=44.6043165467626, Blast_Score=331, Evalue=6e-92, Organism=Caenorhabditis elegans, GI17553148, Length=195, Percent_Identity=33.8461538461538, Blast_Score=127, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17553150, Length=195, Percent_Identity=33.8461538461538, Blast_Score=127, Evalue=9e-30, Organism=Caenorhabditis elegans, GI71984923, Length=195, Percent_Identity=33.8461538461538, Blast_Score=127, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323760, Length=428, Percent_Identity=27.1028037383178, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324815, Length=349, Percent_Identity=27.5071633237822, Blast_Score=113, Evalue=6e-26, Organism=Drosophila melanogaster, GI24641571, Length=162, Percent_Identity=37.037037037037, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24581568, Length=180, Percent_Identity=34.4444444444444, Blast_Score=97, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17; =6.3.2.12 [H]
Molecular weight: Translated: 44440; Mature: 44309
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSASLAAWLARLETLHPSAIELGLERVRRVKDAMGLAPDFPLIVVGGTNGKGSTCAYL CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHH EAVFGAAGYKTGLYTSPHLLRYNERVRIAGKEVDDADLVAAFEAVDRARGDVALTYFEFG HHHHHCCCCCCCCCCCCHHEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEHHH TLAAMAQFVAAKVDVAILEVGLGGRLDAVNVFDADAAIVTSVDLDHMDYLGDTREQIGFE HHHHHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCEEEEECCHHHHHHHCCHHHHHCCH KAGIYRAGRPAVCADPEPPASLLAHAGKVGADLRRLGRDFSAARAGERWTYHSRALSWPD HHCCEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCEECCCCCCCCC LPLPAMAGPCQLRNAAGALAVLEALQARLPTSSEAIRRGVAEARVAGRFQRIGRRPEVIV CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE DVAHNPEAARALASTLREQPISGRTLAVVGMLADKDAGAVVAALADGVDAWWTCTPDSPR EECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCC ARDASSLAAVLHAHGVRSVNVQPGVKAALAAARSAAGEDDRILVFGSFYTVAAVLDHAAT CCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHC QQ CC >Mature Secondary Structure PPSASLAAWLARLETLHPSAIELGLERVRRVKDAMGLAPDFPLIVVGGTNGKGSTCAYL CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHH EAVFGAAGYKTGLYTSPHLLRYNERVRIAGKEVDDADLVAAFEAVDRARGDVALTYFEFG HHHHHCCCCCCCCCCCCHHEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEHHH TLAAMAQFVAAKVDVAILEVGLGGRLDAVNVFDADAAIVTSVDLDHMDYLGDTREQIGFE HHHHHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCEEEEECCHHHHHHHCCHHHHHCCH KAGIYRAGRPAVCADPEPPASLLAHAGKVGADLRRLGRDFSAARAGERWTYHSRALSWPD HHCCEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCEECCCCCCCCC LPLPAMAGPCQLRNAAGALAVLEALQARLPTSSEAIRRGVAEARVAGRFQRIGRRPEVIV CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE DVAHNPEAARALASTLREQPISGRTLAVVGMLADKDAGAVVAALADGVDAWWTCTPDSPR EECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCC ARDASSLAAVLHAHGVRSVNVQPGVKAALAAARSAAGEDDRILVFGSFYTVAAVLDHAAT CCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHC QQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3040739; 3040734; 9205837; 9278503; 1989505 [H]