Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317928

Identifier: 74317928

GI number: 74317928

Start: 2006143

End: 2006787

Strand: Reverse

Name: 74317928

Synonym: Tbd_1910

Alternate gene names: NA

Gene position: 2006787-2006143 (Counterclockwise)

Preceding gene: 74317929

Following gene: 74317927

Centisome position: 68.97

GC content: 72.25

Gene sequence:

>645_bases
ATGCCGCCACCCAGCAGTAGTGAAAATGAGCTCAGGCGCCGCGCCCGCCGGCGGCTGATCGGCGCGGTCGCGCTGACGCT
CGTCGCGGTCATCGCGCTGCCGCTGCTGCTCGAAGACGAACCGCCGCCCGCCAGTTCGCTCGCCGTGCGCATGGCGACCC
CCTTACCTGATAGCGAAACGTCTGCGCAGCCGGCTCCGGCGGTCGATCCGCCTGCGCAGACCCGCGGGACGGAGCAAGCC
GAGCCGTCGACCCCGGCGCGGGCCGATCCCGATCCCGCCCTCCCTGCATCCAAGCCCCAATCCGCTGCCCCCGAGGTTCA
TCCGGCCGCGCCCACCGCCAAACCCAAGGCGCCCGCCCAGACGGCCGTGGCAAAGCCGGCTCCGGCTCCCCCCCCGCAAA
AAACCCCGACATCCACGACTGCCGCGGCCGAAGTGTTCGTCGTGCAACTCGCCGCCCTGGCCGACGTCGAAAAGGCAGGC
GCCCTCAAGGCGCGTGCGACGCTGGCGGGGCTGCCGGCCTACACCGACACCGTCGGCACGCTGACCCGCGTTCGCGTCGG
CCCTTACGCGTCGCGCGAGGCCGCGGCCAACGCGGCGCAGACGCTCGCGCAGAACGGAATGAAAGGGCAGGTGCTCGCCA
AGTGA

Upstream 100 bases:

>100_bases
GGCGTGAAGGCGGCGCTTGCGGCGGCGCGAAGTGCAGCCGGTGAAGATGATAGAATCCTCGTCTTCGGTTCGTTCTACAC
CGTCGCTGCAGTCCTCGATC

Downstream 100 bases:

>100_bases
GCCTGCTCGACCTGATCGTGGTGCTCGTGCTGCTGCTGGCCGTCGTGCGCGGCCTGATGCGCGGTCTGGTCGACACGCTG
TTTTCGCTTGCCGCATGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPPPSSSENELRRRARRRLIGAVALTLVAVIALPLLLEDEPPPASSLAVRMATPLPDSETSAQPAPAVDPPAQTRGTEQA
EPSTPARADPDPALPASKPQSAAPEVHPAAPTAKPKAPAQTAVAKPAPAPPPQKTPTSTTAAAEVFVVQLAALADVEKAG
ALKARATLAGLPAYTDTVGTLTRVRVGPYASREAAANAAQTLAQNGMKGQVLAK

Sequences:

>Translated_214_residues
MPPPSSSENELRRRARRRLIGAVALTLVAVIALPLLLEDEPPPASSLAVRMATPLPDSETSAQPAPAVDPPAQTRGTEQA
EPSTPARADPDPALPASKPQSAAPEVHPAAPTAKPKAPAQTAVAKPAPAPPPQKTPTSTTAAAEVFVVQLAALADVEKAG
ALKARATLAGLPAYTDTVGTLTRVRVGPYASREAAANAAQTLAQNGMKGQVLAK
>Mature_213_residues
PPPSSSENELRRRARRRLIGAVALTLVAVIALPLLLEDEPPPASSLAVRMATPLPDSETSAQPAPAVDPPAQTRGTEQAE
PSTPARADPDPALPASKPQSAAPEVHPAAPTAKPKAPAQTAVAKPAPAPPPQKTPTSTTAAAEVFVVQLAALADVEKAGA
LKARATLAGLPAYTDTVGTLTRVRVGPYASREAAANAAQTLAQNGMKGQVLAK

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21760; Mature: 21629

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPSSSENELRRRARRRLIGAVALTLVAVIALPLLLEDEPPPASSLAVRMATPLPDSET
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCC
SAQPAPAVDPPAQTRGTEQAEPSTPARADPDPALPASKPQSAAPEVHPAAPTAKPKAPAQ
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
TAVAKPAPAPPPQKTPTSTTAAAEVFVVQLAALADVEKAGALKARATLAGLPAYTDTVGT
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
LTRVRVGPYASREAAANAAQTLAQNGMKGQVLAK
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
PPPSSSENELRRRARRRLIGAVALTLVAVIALPLLLEDEPPPASSLAVRMATPLPDSET
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCC
SAQPAPAVDPPAQTRGTEQAEPSTPARADPDPALPASKPQSAAPEVHPAAPTAKPKAPAQ
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
TAVAKPAPAPPPQKTPTSTTAAAEVFVVQLAALADVEKAGALKARATLAGLPAYTDTVGT
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
LTRVRVGPYASREAAANAAQTLAQNGMKGQVLAK
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA