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The map label for this gene is sspA [H]

Identifier: 74317848

GI number: 74317848

Start: 1929561

End: 1930160

Strand: Reverse

Name: sspA [H]

Synonym: Tbd_1830

Alternate gene names: 74317848

Gene position: 1930160-1929561 (Counterclockwise)

Preceding gene: 74317849

Following gene: 74317847

Centisome position: 66.33

GC content: 60.67

Gene sequence:

>600_bases
ATGATGACCCTATATTCCGGCAGTACCGACCCGTACAGCCATCGCTGCCGCATCGTCCTGTTCGAAAAGGACATGGACTT
CGAAATCATCGATGTGGACATGCACAACAAGCCGGAAGAAATCGCCAGCATCAGCCCGAGCGGCAAGATGCCGGTGCTCG
TCGAGCGCGACCTCGTCCTGACCGAATCCAACATCATCAACGAATACATCGACGAGCGCTTTCCCCATCCGCAGCTGATG
CCGCCCGACCCCGTGATGCGTGCGCGGGCACGGCTGGTGCTGTTCAACTTCGAGCACGACCTGTTCTCGCACGTCAACAC
GCTCGAACACAGTCTCGGCAAGGGCTCCGACAAGGCGCGCCAGGAGATCCGCGACAGCCTGTCGCAGCTCACGCCTATCT
TGACCAAGCAGAAATACCTGATGAACGACGAGTTTTCCATGCTCGACGTCGCGATCGCGCCGCTGCTGTGGCGGATCGAG
CACTACGGCATCGAACTGCCGAAGATGGCCGCGCCGGTGCTCAAGTACCGGGAGCGGCTGTTCAGCCGCCCGGCCTTCAT
CAGCGCGCTGACTCCGACCGAGAAGGCGTTGCGCAAGTAG

Upstream 100 bases:

>100_bases
CGTCAGCACGCCGCTCGCCAACAGCCGGACAGTGTCCGGCTGTTGGCGTTTTAAGCATTAAACATACGCCACACGCGCAC
TACCTGAGGGAGCCCCCGTC

Downstream 100 bases:

>100_bases
GCGCGCCCATACGCTTGCCGTGGCCGAGATCTCGACCAAACCCTACCTGATCCGCGCGCTATACGAATGGTGCGCCGACT
CCGGGTACACGCCGCAGCTC

Product: stringent starvation protein a

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MMTLYSGSTDPYSHRCRIVLFEKDMDFEIIDVDMHNKPEEIASISPSGKMPVLVERDLVLTESNIINEYIDERFPHPQLM
PPDPVMRARARLVLFNFEHDLFSHVNTLEHSLGKGSDKARQEIRDSLSQLTPILTKQKYLMNDEFSMLDVAIAPLLWRIE
HYGIELPKMAAPVLKYRERLFSRPAFISALTPTEKALRK

Sequences:

>Translated_199_residues
MMTLYSGSTDPYSHRCRIVLFEKDMDFEIIDVDMHNKPEEIASISPSGKMPVLVERDLVLTESNIINEYIDERFPHPQLM
PPDPVMRARARLVLFNFEHDLFSHVNTLEHSLGKGSDKARQEIRDSLSQLTPILTKQKYLMNDEFSMLDVAIAPLLWRIE
HYGIELPKMAAPVLKYRERLFSRPAFISALTPTEKALRK
>Mature_199_residues
MMTLYSGSTDPYSHRCRIVLFEKDMDFEIIDVDMHNKPEEIASISPSGKMPVLVERDLVLTESNIINEYIDERFPHPQLM
PPDPVMRARARLVLFNFEHDLFSHVNTLEHSLGKGSDKARQEIRDSLSQLTPILTKQKYLMNDEFSMLDVAIAPLLWRIE
HYGIELPKMAAPVLKYRERLFSRPAFISALTPTEKALRK

Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI38016131, Length=173, Percent_Identity=32.3699421965318, Blast_Score=87, Evalue=7e-18,
Organism=Homo sapiens, GI4758484, Length=200, Percent_Identity=30.5, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI300360534, Length=193, Percent_Identity=30.5699481865285, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI300360569, Length=163, Percent_Identity=33.1288343558282, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI300360567, Length=95, Percent_Identity=38.9473684210526, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI300360571, Length=85, Percent_Identity=41.1764705882353, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI300360532, Length=193, Percent_Identity=27.979274611399, Blast_Score=68, Evalue=5e-12,
Organism=Escherichia coli, GI1789624, Length=199, Percent_Identity=43.7185929648241, Blast_Score=177, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17551302, Length=198, Percent_Identity=32.8282828282828, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17556142, Length=174, Percent_Identity=28.735632183908, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21355779, Length=117, Percent_Identity=31.6239316239316, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24660979, Length=98, Percent_Identity=36.734693877551, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 23056; Mature: 23056

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLYSGSTDPYSHRCRIVLFEKDMDFEIIDVDMHNKPEEIASISPSGKMPVLVERDLVL
CEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCEEEECCEEE
TESNIINEYIDERFPHPQLMPPDPVMRARARLVLFNFEHDLFSHVNTLEHSLGKGSDKAR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCHHHH
QEIRDSLSQLTPILTKQKYLMNDEFSMLDVAIAPLLWRIEHYGIELPKMAAPVLKYRERL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FSRPAFISALTPTEKALRK
HCCCCCEEECCCHHHHHCC
>Mature Secondary Structure
MMTLYSGSTDPYSHRCRIVLFEKDMDFEIIDVDMHNKPEEIASISPSGKMPVLVERDLVL
CEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCEEEECCEEE
TESNIINEYIDERFPHPQLMPPDPVMRARARLVLFNFEHDLFSHVNTLEHSLGKGSDKAR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCHHHH
QEIRDSLSQLTPILTKQKYLMNDEFSMLDVAIAPLLWRIEHYGIELPKMAAPVLKYRERL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FSRPAFISALTPTEKALRK
HCCCCCEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]