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The map label for this gene is petC [H]

Identifier: 74317849

GI number: 74317849

Start: 1930263

End: 1930988

Strand: Reverse

Name: petC [H]

Synonym: Tbd_1831

Alternate gene names: 74317849

Gene position: 1930988-1930263 (Counterclockwise)

Preceding gene: 74317850

Following gene: 74317848

Centisome position: 66.36

GC content: 61.43

Gene sequence:

>726_bases
ATGAAACGCGTGAAGAATTTTCTTTTCCTGCTGGTGGCCGCGCCCGTCGTGGCTTTTGCATCGGGCCCCAGCGTTCACCT
GGACAAGGCGCCGGTCAACCTGAGCGACCACGAGTCGCTGCAGCGCGGCGCCCGCACCTTCGTCAACTACTGCCTGAACT
GCCACAGCGCTTCGTCGATGCGCTACATCCGGCTGCAGGACATCGGCCTGACCGAGGATCAGATCAAGGAAAACCTGATG
TTCGCGGCCGAGAAGCCGGGCGAGCTGATGAAGGTCGGCATGACCAAGGCGGACGGCGCTGCGTGGTTCGGCGCGACGCC
GCCCGACCTCAGCGTGATCGCGCGTTCGCGTAGCGCCGACTGGCTCTACACTTACCTGCGCGGCTTCTATCGCGACGACA
CGCGGCCGACTGGCTGGAACAACACCGTTTTCGACAAGGTGGGCATGCCGCATGTGCTGTGGAACCTGCAGGGTGAGCAG
GTCCCGGTCTACAAGAAGGAAGGCGAGCACCAGGTGATCGAGCGTCTTGCGCTCGCCAAGCCTGGCAGCGTGAGCCTCGC
CGAGTACGATGCGATCGTCGGTGATCTCGTCAATTATCTGGTGTGGATGGGCGAGCCCGCGCAGGTGCAGCGCAAGCAAC
TCGGCGTCATCGTTCTGATTTTCCTGGCCGTATTCTTCGTGGTGGCCTATTACCTGAAGAAAGAGTTCTGGAAAGACGTT
CACTGA

Upstream 100 bases:

>100_bases
CCAGGTGTTATCGGTCATCTACTTCCTGTTTTTCCTGTTGATGCCCTGGTATACCTCGATTGACAAAACCAAACCGGAAC
CGGAAAGGGTGACTGGCTAA

Downstream 100 bases:

>100_bases
GTCGTCAGCACGCCGCTCGCCAACAGCCGGACAGTGTCCGGCTGTTGGCGTTTTAAGCATTAAACATACGCCACACGCGC
ACTACCTGAGGGAGCCCCCG

Product: ubiquinol-cytochrome c reductase cytochrome c1 subunit

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKRVKNFLFLLVAAPVVAFASGPSVHLDKAPVNLSDHESLQRGARTFVNYCLNCHSASSMRYIRLQDIGLTEDQIKENLM
FAAEKPGELMKVGMTKADGAAWFGATPPDLSVIARSRSADWLYTYLRGFYRDDTRPTGWNNTVFDKVGMPHVLWNLQGEQ
VPVYKKEGEHQVIERLALAKPGSVSLAEYDAIVGDLVNYLVWMGEPAQVQRKQLGVIVLIFLAVFFVVAYYLKKEFWKDV
H

Sequences:

>Translated_241_residues
MKRVKNFLFLLVAAPVVAFASGPSVHLDKAPVNLSDHESLQRGARTFVNYCLNCHSASSMRYIRLQDIGLTEDQIKENLM
FAAEKPGELMKVGMTKADGAAWFGATPPDLSVIARSRSADWLYTYLRGFYRDDTRPTGWNNTVFDKVGMPHVLWNLQGEQ
VPVYKKEGEHQVIERLALAKPGSVSLAEYDAIVGDLVNYLVWMGEPAQVQRKQLGVIVLIFLAVFFVVAYYLKKEFWKDV
H
>Mature_241_residues
MKRVKNFLFLLVAAPVVAFASGPSVHLDKAPVNLSDHESLQRGARTFVNYCLNCHSASSMRYIRLQDIGLTEDQIKENLM
FAAEKPGELMKVGMTKADGAAWFGATPPDLSVIARSRSADWLYTYLRGFYRDDTRPTGWNNTVFDKVGMPHVLWNLQGEQ
VPVYKKEGEHQVIERLALAKPGSVSLAEYDAIVGDLVNYLVWMGEPAQVQRKQLGVIVLIFLAVFFVVAYYLKKEFWKDV
H

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 27214; Mature: 27214

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVKNFLFLLVAAPVVAFASGPSVHLDKAPVNLSDHESLQRGARTFVNYCLNCHSASSM
CHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
RYIRLQDIGLTEDQIKENLMFAAEKPGELMKVGMTKADGAAWFGATPPDLSVIARSRSAD
EEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEECCCCCCCHHHHHHCCCCH
WLYTYLRGFYRDDTRPTGWNNTVFDKVGMPHVLWNLQGEQVPVYKKEGEHQVIERLALAK
HHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHCC
PGSVSLAEYDAIVGDLVNYLVWMGEPAQVQRKQLGVIVLIFLAVFFVVAYYLKKEFWKDV
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
H
C
>Mature Secondary Structure
MKRVKNFLFLLVAAPVVAFASGPSVHLDKAPVNLSDHESLQRGARTFVNYCLNCHSASSM
CHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
RYIRLQDIGLTEDQIKENLMFAAEKPGELMKVGMTKADGAAWFGATPPDLSVIARSRSAD
EEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEECCCCCCCHHHHHHCCCCH
WLYTYLRGFYRDDTRPTGWNNTVFDKVGMPHVLWNLQGEQVPVYKKEGEHQVIERLALAK
HHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHCC
PGSVSLAEYDAIVGDLVNYLVWMGEPAQVQRKQLGVIVLIFLAVFFVVAYYLKKEFWKDV
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA