| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317815
Identifier: 74317815
GI number: 74317815
Start: 1898709
End: 1899368
Strand: Reverse
Name: 74317815
Synonym: Tbd_1797
Alternate gene names: NA
Gene position: 1899368-1898709 (Counterclockwise)
Preceding gene: 74317816
Following gene: 74317814
Centisome position: 65.27
GC content: 62.27
Gene sequence:
>660_bases ATGTCTGCCATATTTGTCCGCAGCCTGCCGTTTGGCCTGTATATCGGACTGCTCGTCCTCGAAGGCGTGCTCCGCGATTA CGCGACCGGCTTCGACGTGCGCTGGCTATATCCCATCAAGGCGGGGATCGTAGCGCTCGCCCTTGTCGTGCTGTGGCGCC ATTACGCCGAACTCCATAAATATGGCCTGCGCTCCAAGCATGTGCTTTTGTCGCTCGCCGTCGGCATCGTCGTCCTGGTG CTGTGGGTCAACCTCGATGCCGGATGGATGTTGCTCGGCGAAGCAGGCGAGGGGTACGACCCGAGGGGCGCCGAGGGTCG CATCGACTGGCTGCTCGTCGCGTTCCGCATCGCGGGCGCCGCGCTCGTGGTGCCGATCATGGAGGAGCTGTTCTGGCGCT CGTTCCTTCAGCGCTGGCTGCAGCAGTCCGATTTCTTGGCGCTCGATCCGGGCCGGGTCGGCGTGAAGGCGCTCTTGATA GCGAGCGCGCTATTCGCAGTGGAGCATATTCAGTGGTTCGCTGGATTGATCGCAGGTCTGGCTTACGGCTGGCTGTATAT CCATACGCGCAACCTGTGGGCCCCCGTTGTCGCGCACGCGACAACCAACGGCTTGCTGGGTGCCTATGTCGTTACGACGG AGCAGTGGAGGTTTTGGTGA
Upstream 100 bases:
>100_bases CAAGGCAGCCGCTCCGGCTGCCGACGCCGACGCCGACGCGATCAGCAAGGGCATTTCGGGTCTGTGACAAGAGGCGGGCG CGAAGGCGCTCGCTTGCCTT
Downstream 100 bases:
>100_bases AGAAACGTTTGGTTGGGCGTCTAAAAGAATTGCCGCGGGAGACCGTGCAGCGCGGATGCGAGCCGCGCCGCGAAAAGGTC GGGCGCGGACGGCGCGACGG
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: CAAX Prenyl Protease-Related Protein; CAAX Amino Terminal Protease Family Protein; Caax Prenyl Protease-Related Protein; Protease Abi Superfamily
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSAIFVRSLPFGLYIGLLVLEGVLRDYATGFDVRWLYPIKAGIVALALVVLWRHYAELHKYGLRSKHVLLSLAVGIVVLV LWVNLDAGWMLLGEAGEGYDPRGAEGRIDWLLVAFRIAGAALVVPIMEELFWRSFLQRWLQQSDFLALDPGRVGVKALLI ASALFAVEHIQWFAGLIAGLAYGWLYIHTRNLWAPVVAHATTNGLLGAYVVTTEQWRFW
Sequences:
>Translated_219_residues MSAIFVRSLPFGLYIGLLVLEGVLRDYATGFDVRWLYPIKAGIVALALVVLWRHYAELHKYGLRSKHVLLSLAVGIVVLV LWVNLDAGWMLLGEAGEGYDPRGAEGRIDWLLVAFRIAGAALVVPIMEELFWRSFLQRWLQQSDFLALDPGRVGVKALLI ASALFAVEHIQWFAGLIAGLAYGWLYIHTRNLWAPVVAHATTNGLLGAYVVTTEQWRFW >Mature_218_residues SAIFVRSLPFGLYIGLLVLEGVLRDYATGFDVRWLYPIKAGIVALALVVLWRHYAELHKYGLRSKHVLLSLAVGIVVLVL WVNLDAGWMLLGEAGEGYDPRGAEGRIDWLLVAFRIAGAALVVPIMEELFWRSFLQRWLQQSDFLALDPGRVGVKALLIA SALFAVEHIQWFAGLIAGLAYGWLYIHTRNLWAPVVAHATTNGLLGAYVVTTEQWRFW
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24573; Mature: 24442
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIFVRSLPFGLYIGLLVLEGVLRDYATGFDVRWLYPIKAGIVALALVVLWRHYAELHK CCCEEEHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH YGLRSKHVLLSLAVGIVVLVLWVNLDAGWMLLGEAGEGYDPRGAEGRIDWLLVAFRIAGA HCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALVVPIMEELFWRSFLQRWLQQSDFLALDPGRVGVKALLIASALFAVEHIQWFAGLIAGL HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGWLYIHTRNLWAPVVAHATTNGLLGAYVVTTEQWRFW HHHHHEEEECCHHHHHHHHHHCCCCEEEEEEEECCCCCC >Mature Secondary Structure SAIFVRSLPFGLYIGLLVLEGVLRDYATGFDVRWLYPIKAGIVALALVVLWRHYAELHK CCEEEHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH YGLRSKHVLLSLAVGIVVLVLWVNLDAGWMLLGEAGEGYDPRGAEGRIDWLLVAFRIAGA HCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALVVPIMEELFWRSFLQRWLQQSDFLALDPGRVGVKALLIASALFAVEHIQWFAGLIAGL HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGWLYIHTRNLWAPVVAHATTNGLLGAYVVTTEQWRFW HHHHHEEEECCHHHHHHHHHHCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA