| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317816
Identifier: 74317816
GI number: 74317816
Start: 1899402
End: 1900352
Strand: Reverse
Name: 74317816
Synonym: Tbd_1798
Alternate gene names: NA
Gene position: 1900352-1899402 (Counterclockwise)
Preceding gene: 74317817
Following gene: 74317815
Centisome position: 65.31
GC content: 62.78
Gene sequence:
>951_bases ATGCAACATATTAAAAAGGCGTATGTATCCTTGGTGTTGGCCGCGCTCGTTACTGGCTGTGGAGACAAGAAGGAGGAGGC CGCCGCCGACAAGCCAGCGTCGCAGGTCGCAGCTAAGGTCAATGGCACCGAGCTAACGGTGCACCAAGTGAACTATGCGC TTCAGCGCATTCCCAATCTCGACAAGGATCAAGCCAAGCCGGCGTCGCTCCAGGTGGTGCGTAACTTGGTCGATCAGGAA CTGGTTGTGCAGAGAGCGCTCGAGGAGAAGCTGGACCGCGATCCGCGGGTTGTTCAAGCCGTGGACAGTGCGCGCCGCCA GATCCTCGCCGAGGCCTATATGGCCCGTAAGCTCGGCACGCCGAGCGAGCCGAGCGACGGGGAGATCTCGGAGTACTTCA ACAGCCACCCCGAGATGTTCGCGCAGCGAAAGATCTACCGCCTGCAGGAAGTCTCGATCCAGGCGCCAAAGGAAAAGCAC GACGCGATCCGGAAACAACTTGAGGCGTCGAAGACGCTTAATGATTTCCTGGCGTGGCTCAAGGCTGAAAATCTCCCGGC GAAAGTGGGGCAGGCCGTGAAGCCCGCGGAGCAGTTACCTGCCGCCGTGCTGCCGAAGTTGGCGCAAATGCCGAACGGGC AGGCGCTCGTCGCCAACGCCCCTAACGGGCTTCTGGTTCTCGTCGTCGCCGATTCCCAGGCCCAGCCTGTCACGCTCGAG CAAGCCAAGCCGGCGATTGCCCGCGCGCTTCAGGCCGAGACGCGGCAAAAAGCGGCGAAGGCTGAGCTCGACGCGCTCAA GGCGAACGCCAAGATCGAATACGTCGGTGAATTTGCCGATGCGGGCACGGAAACCACCGCGGCGGCCGCGCAGCCGGCCG CTGCCAAGGCAGCCGCTCCGGCTGCCGACGCCGACGCCGACGCGATCAGCAAGGGCATTTCGGGTCTGTGA
Upstream 100 bases:
>100_bases TCCGGAGCAGGGAGCGACTCTTCTCACATGTCGATGCCCGCGCGCTTGATGTAACATCCCGGTTAAATAATTTCCAATAA CCGGATTCGAGGAAGAAAAA
Downstream 100 bases:
>100_bases CAAGAGGCGGGCGCGAAGGCGCTCGCTTGCCTTATGTCTGCCATATTTGTCCGCAGCCTGCCGTTTGGCCTGTATATCGG ACTGCTCGTCCTCGAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidyl-Prolyl Cis-Trans Isomerase; Parvulin-Like Peptidyl-Prolyl Isomerase; Peptidyl-Prolyl Cis-Trans Isomerase Epsd Family; Peptidyl/Prolyl Cis-Trans Isomerase
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNLDKDQAKPASLQVVRNLVDQE LVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGTPSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKH DAIRKQLEASKTLNDFLAWLKAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAPAADADADAISKGISGL
Sequences:
>Translated_316_residues MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNLDKDQAKPASLQVVRNLVDQE LVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGTPSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKH DAIRKQLEASKTLNDFLAWLKAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAPAADADADAISKGISGL >Mature_316_residues MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNLDKDQAKPASLQVVRNLVDQE LVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGTPSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKH DAIRKQLEASKTLNDFLAWLKAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAPAADADADAISKGISGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33724; Mature: 33724
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNL CCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHCCCC DKDQAKPASLQVVRNLVDQELVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKHDAIRKQLEASKTLNDFLAWL CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE HCCCCCHHHHHHCCCHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCEEHH QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHCCCHHHHHCCC AADADADAISKGISGL CCCCCHHHHHHCCCCC >Mature Secondary Structure MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNL CCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHCCCC DKDQAKPASLQVVRNLVDQELVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKHDAIRKQLEASKTLNDFLAWL CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE HCCCCCHHHHHHCCCHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCEEHH QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHCCCHHHHHCCC AADADADAISKGISGL CCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA