Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317816

Identifier: 74317816

GI number: 74317816

Start: 1899402

End: 1900352

Strand: Reverse

Name: 74317816

Synonym: Tbd_1798

Alternate gene names: NA

Gene position: 1900352-1899402 (Counterclockwise)

Preceding gene: 74317817

Following gene: 74317815

Centisome position: 65.31

GC content: 62.78

Gene sequence:

>951_bases
ATGCAACATATTAAAAAGGCGTATGTATCCTTGGTGTTGGCCGCGCTCGTTACTGGCTGTGGAGACAAGAAGGAGGAGGC
CGCCGCCGACAAGCCAGCGTCGCAGGTCGCAGCTAAGGTCAATGGCACCGAGCTAACGGTGCACCAAGTGAACTATGCGC
TTCAGCGCATTCCCAATCTCGACAAGGATCAAGCCAAGCCGGCGTCGCTCCAGGTGGTGCGTAACTTGGTCGATCAGGAA
CTGGTTGTGCAGAGAGCGCTCGAGGAGAAGCTGGACCGCGATCCGCGGGTTGTTCAAGCCGTGGACAGTGCGCGCCGCCA
GATCCTCGCCGAGGCCTATATGGCCCGTAAGCTCGGCACGCCGAGCGAGCCGAGCGACGGGGAGATCTCGGAGTACTTCA
ACAGCCACCCCGAGATGTTCGCGCAGCGAAAGATCTACCGCCTGCAGGAAGTCTCGATCCAGGCGCCAAAGGAAAAGCAC
GACGCGATCCGGAAACAACTTGAGGCGTCGAAGACGCTTAATGATTTCCTGGCGTGGCTCAAGGCTGAAAATCTCCCGGC
GAAAGTGGGGCAGGCCGTGAAGCCCGCGGAGCAGTTACCTGCCGCCGTGCTGCCGAAGTTGGCGCAAATGCCGAACGGGC
AGGCGCTCGTCGCCAACGCCCCTAACGGGCTTCTGGTTCTCGTCGTCGCCGATTCCCAGGCCCAGCCTGTCACGCTCGAG
CAAGCCAAGCCGGCGATTGCCCGCGCGCTTCAGGCCGAGACGCGGCAAAAAGCGGCGAAGGCTGAGCTCGACGCGCTCAA
GGCGAACGCCAAGATCGAATACGTCGGTGAATTTGCCGATGCGGGCACGGAAACCACCGCGGCGGCCGCGCAGCCGGCCG
CTGCCAAGGCAGCCGCTCCGGCTGCCGACGCCGACGCCGACGCGATCAGCAAGGGCATTTCGGGTCTGTGA

Upstream 100 bases:

>100_bases
TCCGGAGCAGGGAGCGACTCTTCTCACATGTCGATGCCCGCGCGCTTGATGTAACATCCCGGTTAAATAATTTCCAATAA
CCGGATTCGAGGAAGAAAAA

Downstream 100 bases:

>100_bases
CAAGAGGCGGGCGCGAAGGCGCTCGCTTGCCTTATGTCTGCCATATTTGTCCGCAGCCTGCCGTTTGGCCTGTATATCGG
ACTGCTCGTCCTCGAAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidyl-Prolyl Cis-Trans Isomerase; Parvulin-Like Peptidyl-Prolyl Isomerase; Peptidyl-Prolyl Cis-Trans Isomerase Epsd Family; Peptidyl/Prolyl Cis-Trans Isomerase

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNLDKDQAKPASLQVVRNLVDQE
LVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGTPSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKH
DAIRKQLEASKTLNDFLAWLKAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE
QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAPAADADADAISKGISGL

Sequences:

>Translated_316_residues
MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNLDKDQAKPASLQVVRNLVDQE
LVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGTPSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKH
DAIRKQLEASKTLNDFLAWLKAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE
QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAPAADADADAISKGISGL
>Mature_316_residues
MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNLDKDQAKPASLQVVRNLVDQE
LVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGTPSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKH
DAIRKQLEASKTLNDFLAWLKAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE
QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAPAADADADAISKGISGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33724; Mature: 33724

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNL
CCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHCCCC
DKDQAKPASLQVVRNLVDQELVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKHDAIRKQLEASKTLNDFLAWL
CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE
HCCCCCHHHHHHCCCHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCEEHH
QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHCCCHHHHHCCC
AADADADAISKGISGL
CCCCCHHHHHHCCCCC
>Mature Secondary Structure
MQHIKKAYVSLVLAALVTGCGDKKEEAAADKPASQVAAKVNGTELTVHQVNYALQRIPNL
CCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHCCCC
DKDQAKPASLQVVRNLVDQELVVQRALEEKLDRDPRVVQAVDSARRQILAEAYMARKLGT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PSEPSDGEISEYFNSHPEMFAQRKIYRLQEVSIQAPKEKHDAIRKQLEASKTLNDFLAWL
CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KAENLPAKVGQAVKPAEQLPAAVLPKLAQMPNGQALVANAPNGLLVLVVADSQAQPVTLE
HCCCCCHHHHHHCCCHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCEEHH
QAKPAIARALQAETRQKAAKAELDALKANAKIEYVGEFADAGTETTAAAAQPAAAKAAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHCCCHHHHHCCC
AADADADAISKGISGL
CCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA