Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317805

Identifier: 74317805

GI number: 74317805

Start: 1887429

End: 1888316

Strand: Reverse

Name: 74317805

Synonym: Tbd_1787

Alternate gene names: NA

Gene position: 1888316-1887429 (Counterclockwise)

Preceding gene: 74317806

Following gene: 74317804

Centisome position: 64.89

GC content: 51.91

Gene sequence:

>888_bases
ATGGGATTGTCGAGGATCTGTTACCTGCTCATGGCCGACATCCTTGGTCTCATCGACAAATCGAATCGCGTCGATACCGA
GACTGACAGGCTGATACTCGATTTTTTCTCGCATAACGACCGGCTATACCGCAAGCTTGTCGAGGAACTGGCGCCGGACC
GCATTTTGGTCGTCTCCGATCACGGTATGTCTCCATATACTCATCATGTAAACCTGAACGATTTCCTAGTCAAGGGCGGC
TGGCAGAGAAAAAATGCTTCGATGGACGGGTGGCTGCGAGCCGTGGGAAAAACGCTCAAAAGTTTGCTTCCGGTACATTT
CCGAAGAAATCTGGGTAAGAAGCTGCCAGGCGTACGTGAATTTGTCGGGAAACAGAATTATGTGTCAAAGGACACGGTCG
CTATCGCGACAAGCTACATACCAGGTATATATATGAATGACGCCCGCTTCGGCGGGCCAGTTGCGCCGGAGGAGAAGGAA
AAACTGGTCATGGAGATCGTAGGCAGGTTCAACGCCTATGGCCGGGCCAAGAGGAATGGACTGAGTGCGAGACCTTATGC
TGCCGAGCATAAGGGGCGTTATGCACAGGCTTTTTTGCCCGATATCTGGGTCGATCATCCGAACACAATATTTTTCAATG
ATTACGGGCCTTTCATTGCCAAGAATCGGCAATATAAACCGTTCGATTCCTTTGCATATGTCGTGTCGGACATGAACTCG
GGCATCAAGGGGGTCCAGCCTTTGCTGTGCCTCGTCGGGGCTTCGAAGGAAAAGTTGCCCGTAGTGAACACGGGGGACCT
TACGCAGGCTTACCGAATCATGCAGGAATGTATGGTTGTATCCGCTACGAACAGCGGTTCCCACGAAAAGCGGGCCGTCC
GCTCGTAG

Upstream 100 bases:

>100_bases
AAGTTTTTTCCAGATTATAAAAGCCATGGAGGAAAGACGCACGGCAAGCTTTATTCAGCTCGCCCAGGAACATAAAATTG
ATTTCGGTTTTGCCGGATAC

Downstream 100 bases:

>100_bases
TACGCCACATCGACTCTGCCGAACATTCGGCCTCGCAGAGGTCTCCGGCAATAACTCTTTTTTCTCGATGGATACAGGTA
TTCGGATATGGAAGTAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MGLSRICYLLMADILGLIDKSNRVDTETDRLILDFFSHNDRLYRKLVEELAPDRILVVSDHGMSPYTHHVNLNDFLVKGG
WQRKNASMDGWLRAVGKTLKSLLPVHFRRNLGKKLPGVREFVGKQNYVSKDTVAIATSYIPGIYMNDARFGGPVAPEEKE
KLVMEIVGRFNAYGRAKRNGLSARPYAAEHKGRYAQAFLPDIWVDHPNTIFFNDYGPFIAKNRQYKPFDSFAYVVSDMNS
GIKGVQPLLCLVGASKEKLPVVNTGDLTQAYRIMQECMVVSATNSGSHEKRAVRS

Sequences:

>Translated_295_residues
MGLSRICYLLMADILGLIDKSNRVDTETDRLILDFFSHNDRLYRKLVEELAPDRILVVSDHGMSPYTHHVNLNDFLVKGG
WQRKNASMDGWLRAVGKTLKSLLPVHFRRNLGKKLPGVREFVGKQNYVSKDTVAIATSYIPGIYMNDARFGGPVAPEEKE
KLVMEIVGRFNAYGRAKRNGLSARPYAAEHKGRYAQAFLPDIWVDHPNTIFFNDYGPFIAKNRQYKPFDSFAYVVSDMNS
GIKGVQPLLCLVGASKEKLPVVNTGDLTQAYRIMQECMVVSATNSGSHEKRAVRS
>Mature_294_residues
GLSRICYLLMADILGLIDKSNRVDTETDRLILDFFSHNDRLYRKLVEELAPDRILVVSDHGMSPYTHHVNLNDFLVKGGW
QRKNASMDGWLRAVGKTLKSLLPVHFRRNLGKKLPGVREFVGKQNYVSKDTVAIATSYIPGIYMNDARFGGPVAPEEKEK
LVMEIVGRFNAYGRAKRNGLSARPYAAEHKGRYAQAFLPDIWVDHPNTIFFNDYGPFIAKNRQYKPFDSFAYVVSDMNSG
IKGVQPLLCLVGASKEKLPVVNTGDLTQAYRIMQECMVVSATNSGSHEKRAVRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33247; Mature: 33116

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSRICYLLMADILGLIDKSNRVDTETDRLILDFFSHNDRLYRKLVEELAPDRILVVSD
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEC
HGMSPYTHHVNLNDFLVKGGWQRKNASMDGWLRAVGKTLKSLLPVHFRRNLGKKLPGVRE
CCCCCEEEECCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FVGKQNYVSKDTVAIATSYIPGIYMNDARFGGPVAPEEKEKLVMEIVGRFNAYGRAKRNG
HHCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCC
LSARPYAAEHKGRYAQAFLPDIWVDHPNTIFFNDYGPFIAKNRQYKPFDSFAYVVSDMNS
CCCCCCCHHHCCCCHHHHCCHHCCCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHCC
GIKGVQPLLCLVGASKEKLPVVNTGDLTQAYRIMQECMVVSATNSGSHEKRAVRS
CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHCCC
>Mature Secondary Structure 
GLSRICYLLMADILGLIDKSNRVDTETDRLILDFFSHNDRLYRKLVEELAPDRILVVSD
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEC
HGMSPYTHHVNLNDFLVKGGWQRKNASMDGWLRAVGKTLKSLLPVHFRRNLGKKLPGVRE
CCCCCEEEECCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FVGKQNYVSKDTVAIATSYIPGIYMNDARFGGPVAPEEKEKLVMEIVGRFNAYGRAKRNG
HHCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCC
LSARPYAAEHKGRYAQAFLPDIWVDHPNTIFFNDYGPFIAKNRQYKPFDSFAYVVSDMNS
CCCCCCCHHHCCCCHHHHCCHHCCCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHCC
GIKGVQPLLCLVGASKEKLPVVNTGDLTQAYRIMQECMVVSATNSGSHEKRAVRS
CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA