Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317804

Identifier: 74317804

GI number: 74317804

Start: 1886310

End: 1887206

Strand: Reverse

Name: 74317804

Synonym: Tbd_1786

Alternate gene names: NA

Gene position: 1887206-1886310 (Counterclockwise)

Preceding gene: 74317805

Following gene: 74317803

Centisome position: 64.86

GC content: 51.17

Gene sequence:

>897_bases
ATGAGAAGGATAAGAACGTTACTGTCTAAAAAGCCAAGCAAGCTTGTTTTTAATTTACGGAAATATGCTGCGTTTCGGCA
GGCTTGGAAATCAATCAACGTCAATAGGACGAGTTATTCTAAGACCAGAAGGCATTATGATGCAGTGGTAATCGGTAGCG
ACGAAGTGTGGAATATTCAAAATCCCACATTTGCCATGATGCCCGAGTATTTCGGTCGCGGCCTTAACGCAAAAAACATC
ATTACTTACGCCCCGAGTTCCAGCAAGACCACTTATGCGGACGTTGCACAGAACCCTTTGCTGGCAGAGGGCATGCGTAA
CATCCATCATTTCTCCGCACGGGACAGAAATACGTTCGAAATTGTCGAGAAAATTGTTAATAAACCTGTGACTATGGTTC
TTGATCCTACATTTCTAGTCGAATACGACGAGGAAGTCGAAGAGGCGGGGGTCAACTCCCATGGATATGTTCTTGTTTAC
ACATATCAGTTCGATCGCCTCAAGATAGAAAAGACCAGACGATTTGCAAGATCTCGCGGTCTGAGACTGATATCGCCGTG
TTTCTACAATGACTGGTGCGACGAGGTCGTGCCTTGCACCCCCTTCGGCTTCCTGGGGCTGATCCGCGACGCCGAGTACG
TTGTCACGGATACCTTCCATGGCAGCATATTCTCGATTCTCTATGGCAAGCACTTCGGCTCCTATGCGTCCGAAAAGATC
AAGGTGGCCGCGCTCCTCTCGGCGCTGGGCTTGGCCGACAGGGAGTTGGGTGGTGTCGACGATATCGGGTCGGTCCTGGA
TGCGCGGATCGACTATGGAAGGGTGCGGACCTGCATTGAGCAGGAGCGGGACGTCTCGCTGAACTACCTGCGGCAGGCGC
TCGCCCCTGCGGGGTGA

Upstream 100 bases:

>100_bases
TAATTTTGGTGCTTATCTACAAGCTTACGCACTGCAGAAAGCTCTCATCGGAATGGGGCACGACGTCGAATTCATCAGTC
TTTCCGGCCGCGAGGCTAGT

Downstream 100 bases:

>100_bases
GCGGACTCTAGGTATGACAGACAGCCCATACAGCGGAAGCGCGCTCCGTCGCGCGCTCCTGCATTTCTCTACAGGCAAGG
GATTCGGCGCCGTGATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQNPTFAMMPEYFGRGLNAKNI
ITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFEIVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVY
TYQFDRLKIEKTRRFARSRGLRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI
KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG

Sequences:

>Translated_298_residues
MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQNPTFAMMPEYFGRGLNAKNI
ITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFEIVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVY
TYQFDRLKIEKTRRFARSRGLRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI
KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG
>Mature_298_residues
MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQNPTFAMMPEYFGRGLNAKNI
ITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFEIVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVY
TYQFDRLKIEKTRRFARSRGLRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI
KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33966; Mature: 33966

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQ
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCEECCC
NPTFAMMPEYFGRGLNAKNIITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFE
CCCCEECHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHH
IVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVYTYQFDRLKIEKTRRFARSRG
HHHHHHCCCEEEEECCEEEEECHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCC
LRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI
CEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHH
KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG
HHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQ
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCEECCC
NPTFAMMPEYFGRGLNAKNIITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFE
CCCCEECHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHH
IVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVYTYQFDRLKIEKTRRFARSRG
HHHHHHCCCEEEEECCEEEEECHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCC
LRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI
CEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHH
KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG
HHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA