| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317804
Identifier: 74317804
GI number: 74317804
Start: 1886310
End: 1887206
Strand: Reverse
Name: 74317804
Synonym: Tbd_1786
Alternate gene names: NA
Gene position: 1887206-1886310 (Counterclockwise)
Preceding gene: 74317805
Following gene: 74317803
Centisome position: 64.86
GC content: 51.17
Gene sequence:
>897_bases ATGAGAAGGATAAGAACGTTACTGTCTAAAAAGCCAAGCAAGCTTGTTTTTAATTTACGGAAATATGCTGCGTTTCGGCA GGCTTGGAAATCAATCAACGTCAATAGGACGAGTTATTCTAAGACCAGAAGGCATTATGATGCAGTGGTAATCGGTAGCG ACGAAGTGTGGAATATTCAAAATCCCACATTTGCCATGATGCCCGAGTATTTCGGTCGCGGCCTTAACGCAAAAAACATC ATTACTTACGCCCCGAGTTCCAGCAAGACCACTTATGCGGACGTTGCACAGAACCCTTTGCTGGCAGAGGGCATGCGTAA CATCCATCATTTCTCCGCACGGGACAGAAATACGTTCGAAATTGTCGAGAAAATTGTTAATAAACCTGTGACTATGGTTC TTGATCCTACATTTCTAGTCGAATACGACGAGGAAGTCGAAGAGGCGGGGGTCAACTCCCATGGATATGTTCTTGTTTAC ACATATCAGTTCGATCGCCTCAAGATAGAAAAGACCAGACGATTTGCAAGATCTCGCGGTCTGAGACTGATATCGCCGTG TTTCTACAATGACTGGTGCGACGAGGTCGTGCCTTGCACCCCCTTCGGCTTCCTGGGGCTGATCCGCGACGCCGAGTACG TTGTCACGGATACCTTCCATGGCAGCATATTCTCGATTCTCTATGGCAAGCACTTCGGCTCCTATGCGTCCGAAAAGATC AAGGTGGCCGCGCTCCTCTCGGCGCTGGGCTTGGCCGACAGGGAGTTGGGTGGTGTCGACGATATCGGGTCGGTCCTGGA TGCGCGGATCGACTATGGAAGGGTGCGGACCTGCATTGAGCAGGAGCGGGACGTCTCGCTGAACTACCTGCGGCAGGCGC TCGCCCCTGCGGGGTGA
Upstream 100 bases:
>100_bases TAATTTTGGTGCTTATCTACAAGCTTACGCACTGCAGAAAGCTCTCATCGGAATGGGGCACGACGTCGAATTCATCAGTC TTTCCGGCCGCGAGGCTAGT
Downstream 100 bases:
>100_bases GCGGACTCTAGGTATGACAGACAGCCCATACAGCGGAAGCGCGCTCCGTCGCGCGCTCCTGCATTTCTCTACAGGCAAGG GATTCGGCGCCGTGATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQNPTFAMMPEYFGRGLNAKNI ITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFEIVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVY TYQFDRLKIEKTRRFARSRGLRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG
Sequences:
>Translated_298_residues MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQNPTFAMMPEYFGRGLNAKNI ITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFEIVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVY TYQFDRLKIEKTRRFARSRGLRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG >Mature_298_residues MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQNPTFAMMPEYFGRGLNAKNI ITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFEIVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVY TYQFDRLKIEKTRRFARSRGLRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33966; Mature: 33966
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQ CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCEECCC NPTFAMMPEYFGRGLNAKNIITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFE CCCCEECHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHH IVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVYTYQFDRLKIEKTRRFARSRG HHHHHHCCCEEEEECCEEEEECHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCC LRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI CEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHH KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG HHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure MRRIRTLLSKKPSKLVFNLRKYAAFRQAWKSINVNRTSYSKTRRHYDAVVIGSDEVWNIQ CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCEECCC NPTFAMMPEYFGRGLNAKNIITYAPSSSKTTYADVAQNPLLAEGMRNIHHFSARDRNTFE CCCCEECHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHH IVEKIVNKPVTMVLDPTFLVEYDEEVEEAGVNSHGYVLVYTYQFDRLKIEKTRRFARSRG HHHHHHCCCEEEEECCEEEEECHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCC LRLISPCFYNDWCDEVVPCTPFGFLGLIRDAEYVVTDTFHGSIFSILYGKHFGSYASEKI CEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHH KVAALLSALGLADRELGGVDDIGSVLDARIDYGRVRTCIEQERDVSLNYLRQALAPAG HHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA