| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317803
Identifier: 74317803
GI number: 74317803
Start: 1884755
End: 1886296
Strand: Reverse
Name: 74317803
Synonym: Tbd_1785
Alternate gene names: NA
Gene position: 1886296-1884755 (Counterclockwise)
Preceding gene: 74317804
Following gene: 74317802
Centisome position: 64.83
GC content: 59.79
Gene sequence:
>1542_bases ATGACAGACAGCCCATACAGCGGAAGCGCGCTCCGTCGCGCGCTCCTGCATTTCTCTACAGGCAAGGGATTCGGCGCCGT GATCGGCATCGCCTGGCTGTTTATGCTCGTGCGCGAACTTCCGCTCGCGGATTACGGGGCCTACGTCACGTTCACGGCGT TTCTGAATATCTTCGTGGTTGTCGGGAGTTTCGGCCTGATTGCGGTGGCCGAAAGATATGTGCCCGAGCACCGCTCGCTG TCGTCGGGTCCGGTTCTCGCGCGGTTTTTGACACGGCTGATCGCGCTTCGCGTCGTTCTTTTGGCGGTGGCGTGCCTCGC CATGGCCGGCTTCAGCGCGCATCTCCCCGCCCTTCTTTCCATCGAGGGCATGGCTGATACATTTCTGGTCTTCCAGATCG TGGTCTTCGGTGAGGGGCTATGCCGTTACATCGAAACCATATTCGACTCTCTCTTGCAGCAGAAGTACTCCCAGATATCG ACGCTCTTTCGCTACGGGACCAGGCTTCTCGCCCTGCTCGCATACCCGCTCCTTTCCGACGAAGCACTCGATTTGTTCAC CTGGATCACGATCGAGGCCGTGACCGTGAGCCTCGGCGCGCTGCTTGCCCTCGCTCTTATGTCGAAGATCGTCCGTCAGG CGCGGCACGAAGAGGGGGAGCGCGCGGGGGAAGGCAAACTGGATTATCCCCGCTACATTCGTTACGCGGCGCCGATATAC CTCGGCCGCATACTTGCCCTTTTCAGCGGCATCGAGATGGCGAAATTGGTCACCACGAAAATGCTTGGCCTCGAAGCGTC CGCCGTGTTCGGGTTCTGCGCGTCCCTCGCCATCACGCTCCAGCGTTACCTGCCGACCTATCTCCTCATGGGTATGGTTC GCCCATTGTTCATCACGGCATTTCACTCCGAGCGTCCGCAAAAGCGTCTGGATTTCCTGTTTTCCTTGATCGTCAAGCTG AATATGTTCGCCATATTGCCCGCGCTCGCCGTCACGACGGTGCTGGGCGACGGCGTCGTCCATCTTTTTTCGAGCGGAAA AATAAGCGAGGGCGGGCTGATGCTGACGCTGATGCTCGGGTTCGTGGTAAGCCAGGCCTTGCGAATCGCACACGGGATGG TCTTGATATCGCTCGAGGATGGCAAGGGTTCGCTACTGATTGCAGTCGCGGGGGCGACCGTGTTTGCGCTGTCAGCACTG TTTGTTTCGGTCTACGGCCCGGTCGCCCTGGTCCTCGGACTTGTCGCGGCCGACTTCGTCGCGATGGCGATCGCGGGGCA TCGCATAAGGATGAAATCCTACCGGCTGAATTATCCCTACCGCGGGATCGGCAAGCTGTTCATCGCAACAGTCGGGGCGA CCCTGTTCATTTCATTGCTCGATTTGTCGCTCGCCGGTTACGGCGAAATCAGCCGGGTCCTGGCAGCGGCGGGTCTGGGG ATGGTGCTTTATGCGTTGCTCGCGCAGTCGATCCGCCCCTTCACCGATGAGGAGCGGGGCGCCATCAACCGGATGCTACC GGTCCGCCTTTTTGTGTGGTGA
Upstream 100 bases:
>100_bases GACTATGGAAGGGTGCGGACCTGCATTGAGCAGGAGCGGGACGTCTCGCTGAACTACCTGCGGCAGGCGCTCGCCCCTGC GGGGTGAGCGGACTCTAGGT
Downstream 100 bases:
>100_bases ACAGGAGATGACCGGAACTCACGTGCCGCAACCCGCAAAGAAGGTCTCTAGAACATGCGCGTGATCAATGTTGGGCAGAA TTACCATCTCCGAGGGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MTDSPYSGSALRRALLHFSTGKGFGAVIGIAWLFMLVRELPLADYGAYVTFTAFLNIFVVVGSFGLIAVAERYVPEHRSL SSGPVLARFLTRLIALRVVLLAVACLAMAGFSAHLPALLSIEGMADTFLVFQIVVFGEGLCRYIETIFDSLLQQKYSQIS TLFRYGTRLLALLAYPLLSDEALDLFTWITIEAVTVSLGALLALALMSKIVRQARHEEGERAGEGKLDYPRYIRYAAPIY LGRILALFSGIEMAKLVTTKMLGLEASAVFGFCASLAITLQRYLPTYLLMGMVRPLFITAFHSERPQKRLDFLFSLIVKL NMFAILPALAVTTVLGDGVVHLFSSGKISEGGLMLTLMLGFVVSQALRIAHGMVLISLEDGKGSLLIAVAGATVFALSAL FVSVYGPVALVLGLVAADFVAMAIAGHRIRMKSYRLNYPYRGIGKLFIATVGATLFISLLDLSLAGYGEISRVLAAAGLG MVLYALLAQSIRPFTDEERGAINRMLPVRLFVW
Sequences:
>Translated_513_residues MTDSPYSGSALRRALLHFSTGKGFGAVIGIAWLFMLVRELPLADYGAYVTFTAFLNIFVVVGSFGLIAVAERYVPEHRSL SSGPVLARFLTRLIALRVVLLAVACLAMAGFSAHLPALLSIEGMADTFLVFQIVVFGEGLCRYIETIFDSLLQQKYSQIS TLFRYGTRLLALLAYPLLSDEALDLFTWITIEAVTVSLGALLALALMSKIVRQARHEEGERAGEGKLDYPRYIRYAAPIY LGRILALFSGIEMAKLVTTKMLGLEASAVFGFCASLAITLQRYLPTYLLMGMVRPLFITAFHSERPQKRLDFLFSLIVKL NMFAILPALAVTTVLGDGVVHLFSSGKISEGGLMLTLMLGFVVSQALRIAHGMVLISLEDGKGSLLIAVAGATVFALSAL FVSVYGPVALVLGLVAADFVAMAIAGHRIRMKSYRLNYPYRGIGKLFIATVGATLFISLLDLSLAGYGEISRVLAAAGLG MVLYALLAQSIRPFTDEERGAINRMLPVRLFVW >Mature_512_residues TDSPYSGSALRRALLHFSTGKGFGAVIGIAWLFMLVRELPLADYGAYVTFTAFLNIFVVVGSFGLIAVAERYVPEHRSLS SGPVLARFLTRLIALRVVLLAVACLAMAGFSAHLPALLSIEGMADTFLVFQIVVFGEGLCRYIETIFDSLLQQKYSQIST LFRYGTRLLALLAYPLLSDEALDLFTWITIEAVTVSLGALLALALMSKIVRQARHEEGERAGEGKLDYPRYIRYAAPIYL GRILALFSGIEMAKLVTTKMLGLEASAVFGFCASLAITLQRYLPTYLLMGMVRPLFITAFHSERPQKRLDFLFSLIVKLN MFAILPALAVTTVLGDGVVHLFSSGKISEGGLMLTLMLGFVVSQALRIAHGMVLISLEDGKGSLLIAVAGATVFALSALF VSVYGPVALVLGLVAADFVAMAIAGHRIRMKSYRLNYPYRGIGKLFIATVGATLFISLLDLSLAGYGEISRVLAAAGLGM VLYALLAQSIRPFTDEERGAINRMLPVRLFVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55785; Mature: 55654
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSPYSGSALRRALLHFSTGKGFGAVIGIAWLFMLVRELPLADYGAYVTFTAFLNIFVV CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VGSFGLIAVAERYVPEHRSLSSGPVLARFLTRLIALRVVLLAVACLAMAGFSAHLPALLS HHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHE IEGMADTFLVFQIVVFGEGLCRYIETIFDSLLQQKYSQISTLFRYGTRLLALLAYPLLSD ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EALDLFTWITIEAVTVSLGALLALALMSKIVRQARHEEGERAGEGKLDYPRYIRYAAPIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LGRILALFSGIEMAKLVTTKMLGLEASAVFGFCASLAITLQRYLPTYLLMGMVRPLFITA HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FHSERPQKRLDFLFSLIVKLNMFAILPALAVTTVLGDGVVHLFSSGKISEGGLMLTLMLG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHH FVVSQALRIAHGMVLISLEDGKGSLLIAVAGATVFALSALFVSVYGPVALVLGLVAADFV HHHHHHHHHHCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMAIAGHRIRMKSYRLNYPYRGIGKLFIATVGATLFISLLDLSLAGYGEISRVLAAAGLG HHHHHCCCEEEEHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH MVLYALLAQSIRPFTDEERGAINRMLPVRLFVW HHHHHHHHHHCCCCCCCHHHHHHHCCHHHEEEC >Mature Secondary Structure TDSPYSGSALRRALLHFSTGKGFGAVIGIAWLFMLVRELPLADYGAYVTFTAFLNIFVV CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VGSFGLIAVAERYVPEHRSLSSGPVLARFLTRLIALRVVLLAVACLAMAGFSAHLPALLS HHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHE IEGMADTFLVFQIVVFGEGLCRYIETIFDSLLQQKYSQISTLFRYGTRLLALLAYPLLSD ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EALDLFTWITIEAVTVSLGALLALALMSKIVRQARHEEGERAGEGKLDYPRYIRYAAPIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LGRILALFSGIEMAKLVTTKMLGLEASAVFGFCASLAITLQRYLPTYLLMGMVRPLFITA HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FHSERPQKRLDFLFSLIVKLNMFAILPALAVTTVLGDGVVHLFSSGKISEGGLMLTLMLG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHH FVVSQALRIAHGMVLISLEDGKGSLLIAVAGATVFALSALFVSVYGPVALVLGLVAADFV HHHHHHHHHHCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMAIAGHRIRMKSYRLNYPYRGIGKLFIATVGATLFISLLDLSLAGYGEISRVLAAAGLG HHHHHCCCEEEEHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH MVLYALLAQSIRPFTDEERGAINRMLPVRLFVW HHHHHHHHHHCCCCCCCHHHHHHHCCHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA