| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317800
Identifier: 74317800
GI number: 74317800
Start: 1881478
End: 1882386
Strand: Reverse
Name: 74317800
Synonym: Tbd_1782
Alternate gene names: NA
Gene position: 1882386-1881478 (Counterclockwise)
Preceding gene: 74317801
Following gene: 74317799
Centisome position: 64.69
GC content: 45.76
Gene sequence:
>909_bases ATGGCGTTTCGGAAGCCGAATTTAATTATTGCTGGAGTCGTTAAAGGTGGCACGACGTCAGTGTTCTCGTACTTGTCAGT ACATCCGGATATATGTGTTTCCAGCGTGAAAGAGACTTGTTTCTTTCACGGACTTCGTTATGGGTACGACCTACAGCCTT TCTCTGACTATCTAAATTACTTCCGGCAGTGTGAGAATCAGAAATATATCCTTGAGGCCACTCCAGGATATTTCGAGGGA GGTGCACGCCTCGCACGCGGTCTGAAGGATGCGCTCGGAGAGGATATTAAAGTGCTCTTGTTTCTCCGAGATCCCGTCGA TCGCTTGATCTCGTTCTTTAAGTTTAAGAAAAGCATGCTTGAAATCCCTTTCGATCTCCCTTTGGGCGAATATATTGGCC GCTGCGCAGAGATGGGTTGGGAAGAAAAAAAATCGCAACCGAATGACATGTGGTGGGGAATTGAGGGCGGAAAATACGAT TTATATCTTCAGGAATGGTTTGATGTTTTTGGAAGTAAGGTGAAGGTTCTGTTTTTCGATCAAATCAAGCGCGACGTTCG ATCATTAATGATTGAATTGTGTGAATGGCTGGAGATCTCGCCGGATATCTATCAAGACTTTGTCTTTGAGGTCGAAAACA AAACCATTGGTTACAAGAACAGGCGTCTTCAAGAAGGTGCACTTTTCGTCAATAGAGAATTGGAAAGGTTCTGGCGTGCC CATCCAAAACTGAAGAGCAAACTACGAGATATCTACTTCCGGGTAAACGGCCGGGACCATGTGAACTCCGTTTCCCACGA CTTAATCGAACAGTTGTCGGATTTATACAGGCCGCATAACGCCAGAACGAGGGAAATTCTCGAATCCCGGAATTATGCAA ACCTACCTGCGTGGCTTGAGCAGTCGTGA
Upstream 100 bases:
>100_bases ACGGCCTGTCCTGATTTTGTGAAGCGTTTGCACGGGATGTTTTGTGCGTTGAAAATCGCGCCGCGAAAGCACAACTAAAG ACTCTTTTTTTGGGGACAAG
Downstream 100 bases:
>100_bases ACAAGTCAATTCGCATCCTCGGTACACGCGGGGTACCTGCCGCGCATGGCGGCTTCGAGACCTTTGCCGAGCATCTCGCG CCCTATCTGGTGGAACGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAFRKPNLIIAGVVKGGTTSVFSYLSVHPDICVSSVKETCFFHGLRYGYDLQPFSDYLNYFRQCENQKYILEATPGYFEG GARLARGLKDALGEDIKVLLFLRDPVDRLISFFKFKKSMLEIPFDLPLGEYIGRCAEMGWEEKKSQPNDMWWGIEGGKYD LYLQEWFDVFGSKVKVLFFDQIKRDVRSLMIELCEWLEISPDIYQDFVFEVENKTIGYKNRRLQEGALFVNRELERFWRA HPKLKSKLRDIYFRVNGRDHVNSVSHDLIEQLSDLYRPHNARTREILESRNYANLPAWLEQS
Sequences:
>Translated_302_residues MAFRKPNLIIAGVVKGGTTSVFSYLSVHPDICVSSVKETCFFHGLRYGYDLQPFSDYLNYFRQCENQKYILEATPGYFEG GARLARGLKDALGEDIKVLLFLRDPVDRLISFFKFKKSMLEIPFDLPLGEYIGRCAEMGWEEKKSQPNDMWWGIEGGKYD LYLQEWFDVFGSKVKVLFFDQIKRDVRSLMIELCEWLEISPDIYQDFVFEVENKTIGYKNRRLQEGALFVNRELERFWRA HPKLKSKLRDIYFRVNGRDHVNSVSHDLIEQLSDLYRPHNARTREILESRNYANLPAWLEQS >Mature_301_residues AFRKPNLIIAGVVKGGTTSVFSYLSVHPDICVSSVKETCFFHGLRYGYDLQPFSDYLNYFRQCENQKYILEATPGYFEGG ARLARGLKDALGEDIKVLLFLRDPVDRLISFFKFKKSMLEIPFDLPLGEYIGRCAEMGWEEKKSQPNDMWWGIEGGKYDL YLQEWFDVFGSKVKVLFFDQIKRDVRSLMIELCEWLEISPDIYQDFVFEVENKTIGYKNRRLQEGALFVNRELERFWRAH PKLKSKLRDIYFRVNGRDHVNSVSHDLIEQLSDLYRPHNARTREILESRNYANLPAWLEQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI5174463, Length=287, Percent_Identity=27.1777003484321, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35566; Mature: 35435
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRKPNLIIAGVVKGGTTSVFSYLSVHPDICVSSVKETCFFHGLRYGYDLQPFSDYLNY CCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FRQCENQKYILEATPGYFEGGARLARGLKDALGEDIKVLLFLRDPVDRLISFFKFKKSML HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHH EIPFDLPLGEYIGRCAEMGWEEKKSQPNDMWWGIEGGKYDLYLQEWFDVFGSKVKVLFFD CCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEECCCCEEEHHHHHHHHHCCCCEEEHHHH QIKRDVRSLMIELCEWLEISPDIYQDFVFEVENKTIGYKNRRLQEGALFVNRELERFWRA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HPKLKSKLRDIYFRVNGRDHVNSVSHDLIEQLSDLYRPHNARTREILESRNYANLPAWLE CHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHC QS CC >Mature Secondary Structure AFRKPNLIIAGVVKGGTTSVFSYLSVHPDICVSSVKETCFFHGLRYGYDLQPFSDYLNY CCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FRQCENQKYILEATPGYFEGGARLARGLKDALGEDIKVLLFLRDPVDRLISFFKFKKSML HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHH EIPFDLPLGEYIGRCAEMGWEEKKSQPNDMWWGIEGGKYDLYLQEWFDVFGSKVKVLFFD CCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEECCCCEEEHHHHHHHHHCCCCEEEHHHH QIKRDVRSLMIELCEWLEISPDIYQDFVFEVENKTIGYKNRRLQEGALFVNRELERFWRA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HPKLKSKLRDIYFRVNGRDHVNSVSHDLIEQLSDLYRPHNARTREILESRNYANLPAWLE CHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHC QS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA