| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is exoO [H]
Identifier: 74317801
GI number: 74317801
Start: 1882473
End: 1883498
Strand: Reverse
Name: exoO [H]
Synonym: Tbd_1783
Alternate gene names: 74317801
Gene position: 1883498-1882473 (Counterclockwise)
Preceding gene: 74317802
Following gene: 74317800
Centisome position: 64.73
GC content: 56.04
Gene sequence:
>1026_bases ATGAGAGTACCGAACATTTCACTAAACACCCTGAGTCCGAGTCAAGTTCCACAGGTGAGTGTAATCATCGCCACATACAA CTGTGCGCCGTATCTGGCGGAAGCCATCGAATCTGCGTTGGGGCAGGACGGCGTGAATGTAGAAGTGGTGGTGGTAGATG ACGCGTCGACCGATGGAACCCTCGTGGTAGCACGCCGCTACGAACAGGCGGGGCGGGTAAGGTTGTTCGTGAACGAAGTG AATCGGGGGCCCAGCTTTTCGAGAAACCGGGCTATCAGTGCCGCACGGGGTGAATGGGTGGCCCAATTGGACGGCGATGA TTGGTTCGCTCCCGGTCGGCTTTTAACCTTGCTGCAACTGGCCGATGCTCGTCAGGCAGATCTTGTGGCGGACGATATGT TCATGGTGGAAGACAGTACGCTGCGAGCAGTATCGACTCCCTTTCTCAATAACGGCGTGCCATGGCGGGCAGCACAATCG GTCACGCCTTTGGATGTGATCAAATATGACCTAGGATCGCTGAAGCCGCTGATGCGCCGAGCTTTTCTCGTCGAACATTC GCTGGCGTATGAAGAGGGTCTGAATTACGGTGAGGATTTCCTGTTGCTATTAAAGGCTATGCTGGCTGGTGCGCGCGTCA CGATCGCGCCGGAGCCCATGTACCACTTAAGACGAGGTAACACGGGGTCGTTGACGACTCAGCGCGGCCGCCTGCTTCGT CAGGTCGAGGACACGACAAAGAAACTCATGAGTGATCCGGACATTAGCCGTCGTCCAAGAGTGGTGGCAGCGTTGGGAGC TCGCCTGAATCACGTCAGACGGTTGGCGATGCTTGAAGACGTTATTCGGCTGGGAAAGCAGGGTCATTTTGCGAGCCTCT TCGCAAAATTCTTCGCGGATCCAAAACTCTTCCTCGCACTCCTACGAAGAGGACCAGAAATGATTGCAATACGTGTCCGT CGGCGACTGAATCGCAAGACATTAAGCCGCGCACATCTTCCCCCCGGGGCCCACGGCCTGTCCTGA
Upstream 100 bases:
>100_bases TGGAGATGGGGCGCCATGGTCGAGCCAAAGTTCTAAGTCAGTTTTCTCCGGAGCGCCATTACGAAAAGGTTATGGCGGTT TACGGAAAAGTAGCGAACCG
Downstream 100 bases:
>100_bases TTTTGTGAAGCGTTTGCACGGGATGTTTTGTGCGTTGAAAATCGCGCCGCGAAAGCACAACTAAAGACTCTTTTTTTGGG GACAAGATGGCGTTTCGGAA
Product: glucosyltransferase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MRVPNISLNTLSPSQVPQVSVIIATYNCAPYLAEAIESALGQDGVNVEVVVVDDASTDGTLVVARRYEQAGRVRLFVNEV NRGPSFSRNRAISAARGEWVAQLDGDDWFAPGRLLTLLQLADARQADLVADDMFMVEDSTLRAVSTPFLNNGVPWRAAQS VTPLDVIKYDLGSLKPLMRRAFLVEHSLAYEEGLNYGEDFLLLLKAMLAGARVTIAPEPMYHLRRGNTGSLTTQRGRLLR QVEDTTKKLMSDPDISRRPRVVAALGARLNHVRRLAMLEDVIRLGKQGHFASLFAKFFADPKLFLALLRRGPEMIAIRVR RRLNRKTLSRAHLPPGAHGLS
Sequences:
>Translated_341_residues MRVPNISLNTLSPSQVPQVSVIIATYNCAPYLAEAIESALGQDGVNVEVVVVDDASTDGTLVVARRYEQAGRVRLFVNEV NRGPSFSRNRAISAARGEWVAQLDGDDWFAPGRLLTLLQLADARQADLVADDMFMVEDSTLRAVSTPFLNNGVPWRAAQS VTPLDVIKYDLGSLKPLMRRAFLVEHSLAYEEGLNYGEDFLLLLKAMLAGARVTIAPEPMYHLRRGNTGSLTTQRGRLLR QVEDTTKKLMSDPDISRRPRVVAALGARLNHVRRLAMLEDVIRLGKQGHFASLFAKFFADPKLFLALLRRGPEMIAIRVR RRLNRKTLSRAHLPPGAHGLS >Mature_341_residues MRVPNISLNTLSPSQVPQVSVIIATYNCAPYLAEAIESALGQDGVNVEVVVVDDASTDGTLVVARRYEQAGRVRLFVNEV NRGPSFSRNRAISAARGEWVAQLDGDDWFAPGRLLTLLQLADARQADLVADDMFMVEDSTLRAVSTPFLNNGVPWRAAQS VTPLDVIKYDLGSLKPLMRRAFLVEHSLAYEEGLNYGEDFLLLLKAMLAGARVTIAPEPMYHLRRGNTGSLTTQRGRLLR QVEDTTKKLMSDPDISRRPRVVAALGARLNHVRRLAMLEDVIRLGKQGHFASLFAKFFADPKLFLALLRRGPEMIAIRVR RRLNRKTLSRAHLPPGAHGLS
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fifth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fourth and fifth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=223, Percent_Identity=27.8026905829596, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788372, Length=125, Percent_Identity=32.8, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 37815; Mature: 37815
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVPNISLNTLSPSQVPQVSVIIATYNCAPYLAEAIESALGQDGVNVEVVVVDDASTDGT CCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCE LVVARRYEQAGRVRLFVNEVNRGPSFSRNRAISAARGEWVAQLDGDDWFAPGRLLTLLQL EEEEEEHHHCCCEEEEEEECCCCCCCCHHCCCHHHCCCEEEEECCCCCCCCHHHHHHHHH ADARQADLVADDMFMVEDSTLRAVSTPFLNNGVPWRAAQSVTPLDVIKYDLGSLKPLMRR HCCHHHHHHHCCEEEEECCHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AFLVEHSLAYEEGLNYGEDFLLLLKAMLAGARVTIAPEPMYHLRRGNTGSLTTQRGRLLR HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHH QVEDTTKKLMSDPDISRRPRVVAALGARLNHVRRLAMLEDVIRLGKQGHFASLFAKFFAD HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC PKLFLALLRRGPEMIAIRVRRRLNRKTLSRAHLPPGAHGLS HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRVPNISLNTLSPSQVPQVSVIIATYNCAPYLAEAIESALGQDGVNVEVVVVDDASTDGT CCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCE LVVARRYEQAGRVRLFVNEVNRGPSFSRNRAISAARGEWVAQLDGDDWFAPGRLLTLLQL EEEEEEHHHCCCEEEEEEECCCCCCCCHHCCCHHHCCCEEEEECCCCCCCCHHHHHHHHH ADARQADLVADDMFMVEDSTLRAVSTPFLNNGVPWRAAQSVTPLDVIKYDLGSLKPLMRR HCCHHHHHHHCCEEEEECCHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AFLVEHSLAYEEGLNYGEDFLLLLKAMLAGARVTIAPEPMYHLRRGNTGSLTTQRGRLLR HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHH QVEDTTKKLMSDPDISRRPRVVAALGARLNHVRRLAMLEDVIRLGKQGHFASLFAKFFAD HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC PKLFLALLRRGPEMIAIRVRRRLNRKTLSRAHLPPGAHGLS HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]