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The map label for this gene is recJ [H]

Identifier: 74317789

GI number: 74317789

Start: 1869715

End: 1871412

Strand: Direct

Name: recJ [H]

Synonym: Tbd_1771

Alternate gene names: 74317789

Gene position: 1869715-1871412 (Clockwise)

Preceding gene: 74317786

Following gene: 74317790

Centisome position: 64.26

GC content: 68.61

Gene sequence:

>1698_bases
ATGCCATCGATCACCACGCGCCCCTGTCCGACGGAAGTCTGCGCCGCACTCGAGCAGGCGGGGCTCGCCCCGGCCTGGGC
CCGGCTCTATGCCGCCCGCGGCGTCAGCCACCCCGATCAGATCGCGCACCGTCTGCCTCAATTGCTGCCGCCGACGGCGA
TGCTGAATAGCGACCGCGCCGCGCGACTGCTCGCCGACGCGATCGAGGCGCACAAGAAGCTCCTCATCGTCGGCGACTAC
GATGCCGACGGCGCGACCGCCTGCGCGCTCGGCGTACGCGGCTTGCGCATGCTCGGCGCCCGCGTCGACTATCTCGTGCC
CAACCGGCTCGAGCACGGCTACGGCCTGACGCCCGACATCGTGAGAATCGCCGCCGCGCGGCAACCCGATCTGCTGATCA
CCGTCGACAACGGCATTGCGGCGGTCGAGGGCGTCGCCGCGGCGAACGCGCTGGGTATTCCGGTCCTCGTGACCGACCAC
CACCTTCCCGGGGACGCGCTGCCCGACGCCGCCTGCATCGTCAATCCGAATCAGCCGCACTGCGCCTTCCCGTCGAAAAA
TCTCGCCGGTGTCGGCGTCATGTTCTACGTCCTGCTGGCGCTGCGCGCCGAACTGCGGCGGCGCGGCGCCTACGAACAGG
TCGCCGAGCCCGATCTGCGCGTGCTGCTCGACCTTGTCGCGCTTGGCACGGTCGCCGACGTCGTCAGGCTCGACGCCAAC
AATCGCACGCTGGTCGCGCAGGGGCTCGCCCGCATGCGCGCGGGCCTCGCCTGCCCGGGCATCGCTGCACTGTTCCAGGC
GGCGGGCCGCGAACCCGCACGTGCGACGGTATTCGACCTCGGCTTCATGCTCGGCCCCAGACTGAACGCCGCCGGGCGCA
TCGACGACATGGCGCTCGGCATCGAATGCCTGTTGGCCGACAGCCCATCGGCCGCGCAGCAGCTCGCGCAGCGCCTCGAC
GCGTTGAACCGGGCCCGGCGCGACGTCGAAGCAGACATGCTCGACGAAGCGCTCGCAATACTCGCGCGCTTCAGCCCGAG
CGACAGCTACAGCCTCACCGCCTACCAGCCCGACTGGCACATCGGCGTCATCGGCATCCTGGCGTCGCGCCTCAAGGACA
AGTTCCATCGGCCGACCGTCGTCCTGGCGGCGAGCGAGAGCGGCGAACTCAAGGGGTCGGGACGTTCGATTCCCGGCCTG
CACCTGCGCGATGCACTCGATCTGGTCGACAAGCGCCATCCCGGGCTCATCCTGAAATTCGGCGGACACGCAATGGCCGC
CGGCCTCAGCATCGCCGCCGGTCGCCAAGAGGAATTCGCGCACGCATTCGAAGCGGTCGTGCGCGGCCTCATCGACCCCG
CCGACCTCGAGGGAGTGATAGAAACCGACGGCGAACTCGAACTCGCGGAACATCGCTACGAACTCGCGCTCGAACTCGAG
CATGCCGTATGGGGCCAGGGCTTCCCGGCACCGCTGTTCACCGGCGTCTTCGACGTGGCCGCGCAGCGCGTCGTCGGCGA
CAAGCATCTGAAGCTGACGCTTGCGCGCGACGGCAATGCGTTCGAGGCCATGCGTTTTTTTCAGTCCGACCCGCTGCCGG
AGCGCATACACGCCGTCTACGCACTGATGCCCAACGAGTTCAACGGGCGGCGCACGCTTCAGCTCAAACTCCAGCACTGG
GAACCTGCAGCCCCGTGA

Upstream 100 bases:

>100_bases
CCCGGTGCGCAGGCAAGACAAAAACGGCACTTCACCAGATTCTGAATCCCTGATTGAATCCTGGTTCAGTCGCGACGCGA
TCCACGAATACAATCCGCGT

Downstream 100 bases:

>100_bases
GTGCCCTCAAACCCTGTGCCGACGATCGAGCCAGGATCGCCGCGCGACGCTGCGTCGACGGCGTCGCGGCATCCCGCGCC
CCCCTTCGCCGACGCCTCAG

Product: exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MPSITTRPCPTEVCAALEQAGLAPAWARLYAARGVSHPDQIAHRLPQLLPPTAMLNSDRAARLLADAIEAHKKLLIVGDY
DADGATACALGVRGLRMLGARVDYLVPNRLEHGYGLTPDIVRIAAARQPDLLITVDNGIAAVEGVAAANALGIPVLVTDH
HLPGDALPDAACIVNPNQPHCAFPSKNLAGVGVMFYVLLALRAELRRRGAYEQVAEPDLRVLLDLVALGTVADVVRLDAN
NRTLVAQGLARMRAGLACPGIAALFQAAGREPARATVFDLGFMLGPRLNAAGRIDDMALGIECLLADSPSAAQQLAQRLD
ALNRARRDVEADMLDEALAILARFSPSDSYSLTAYQPDWHIGVIGILASRLKDKFHRPTVVLAASESGELKGSGRSIPGL
HLRDALDLVDKRHPGLILKFGGHAMAAGLSIAAGRQEEFAHAFEAVVRGLIDPADLEGVIETDGELELAEHRYELALELE
HAVWGQGFPAPLFTGVFDVAAQRVVGDKHLKLTLARDGNAFEAMRFFQSDPLPERIHAVYALMPNEFNGRRTLQLKLQHW
EPAAP

Sequences:

>Translated_565_residues
MPSITTRPCPTEVCAALEQAGLAPAWARLYAARGVSHPDQIAHRLPQLLPPTAMLNSDRAARLLADAIEAHKKLLIVGDY
DADGATACALGVRGLRMLGARVDYLVPNRLEHGYGLTPDIVRIAAARQPDLLITVDNGIAAVEGVAAANALGIPVLVTDH
HLPGDALPDAACIVNPNQPHCAFPSKNLAGVGVMFYVLLALRAELRRRGAYEQVAEPDLRVLLDLVALGTVADVVRLDAN
NRTLVAQGLARMRAGLACPGIAALFQAAGREPARATVFDLGFMLGPRLNAAGRIDDMALGIECLLADSPSAAQQLAQRLD
ALNRARRDVEADMLDEALAILARFSPSDSYSLTAYQPDWHIGVIGILASRLKDKFHRPTVVLAASESGELKGSGRSIPGL
HLRDALDLVDKRHPGLILKFGGHAMAAGLSIAAGRQEEFAHAFEAVVRGLIDPADLEGVIETDGELELAEHRYELALELE
HAVWGQGFPAPLFTGVFDVAAQRVVGDKHLKLTLARDGNAFEAMRFFQSDPLPERIHAVYALMPNEFNGRRTLQLKLQHW
EPAAP
>Mature_564_residues
PSITTRPCPTEVCAALEQAGLAPAWARLYAARGVSHPDQIAHRLPQLLPPTAMLNSDRAARLLADAIEAHKKLLIVGDYD
ADGATACALGVRGLRMLGARVDYLVPNRLEHGYGLTPDIVRIAAARQPDLLITVDNGIAAVEGVAAANALGIPVLVTDHH
LPGDALPDAACIVNPNQPHCAFPSKNLAGVGVMFYVLLALRAELRRRGAYEQVAEPDLRVLLDLVALGTVADVVRLDANN
RTLVAQGLARMRAGLACPGIAALFQAAGREPARATVFDLGFMLGPRLNAAGRIDDMALGIECLLADSPSAAQQLAQRLDA
LNRARRDVEADMLDEALAILARFSPSDSYSLTAYQPDWHIGVIGILASRLKDKFHRPTVVLAASESGELKGSGRSIPGLH
LRDALDLVDKRHPGLILKFGGHAMAAGLSIAAGRQEEFAHAFEAVVRGLIDPADLEGVIETDGELELAEHRYELALELEH
AVWGQGFPAPLFTGVFDVAAQRVVGDKHLKLTLARDGNAFEAMRFFQSDPLPERIHAVYALMPNEFNGRRTLQLKLQHWE
PAAP

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=557, Percent_Identity=48.4739676840215, Blast_Score=494, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.11.6

Molecular weight: Translated: 60665; Mature: 60533

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSITTRPCPTEVCAALEQAGLAPAWARLYAARGVSHPDQIAHRLPQLLPPTAMLNSDRA
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCHH
ARLLADAIEAHKKLLIVGDYDADGATACALGVRGLRMLGARVDYLVPNRLEHGYGLTPDI
HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
VRIAAARQPDLLITVDNGIAAVEGVAAANALGIPVLVTDHHLPGDALPDAACIVNPNQPH
HHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCCC
CAFPSKNLAGVGVMFYVLLALRAELRRRGAYEQVAEPDLRVLLDLVALGTVADVVRLDAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHEECCC
NRTLVAQGLARMRAGLACPGIAALFQAAGREPARATVFDLGFMLGPRLNAAGRIDDMALG
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHC
IECLLADSPSAAQQLAQRLDALNRARRDVEADMLDEALAILARFSPSDSYSLTAYQPDWH
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
IGVIGILASRLKDKFHRPTVVLAASESGELKGSGRSIPGLHLRDALDLVDKRHPGLILKF
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
GGHAMAAGLSIAAGRQEEFAHAFEAVVRGLIDPADLEGVIETDGELELAEHRYELALELE
CCCHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEHHHHHHHHEEEEH
HAVWGQGFPAPLFTGVFDVAAQRVVGDKHLKLTLARDGNAFEAMRFFQSDPLPERIHAVY
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHH
ALMPNEFNGRRTLQLKLQHWEPAAP
HCCCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
PSITTRPCPTEVCAALEQAGLAPAWARLYAARGVSHPDQIAHRLPQLLPPTAMLNSDRA
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCHH
ARLLADAIEAHKKLLIVGDYDADGATACALGVRGLRMLGARVDYLVPNRLEHGYGLTPDI
HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
VRIAAARQPDLLITVDNGIAAVEGVAAANALGIPVLVTDHHLPGDALPDAACIVNPNQPH
HHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCCC
CAFPSKNLAGVGVMFYVLLALRAELRRRGAYEQVAEPDLRVLLDLVALGTVADVVRLDAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHEECCC
NRTLVAQGLARMRAGLACPGIAALFQAAGREPARATVFDLGFMLGPRLNAAGRIDDMALG
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHC
IECLLADSPSAAQQLAQRLDALNRARRDVEADMLDEALAILARFSPSDSYSLTAYQPDWH
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
IGVIGILASRLKDKFHRPTVVLAASESGELKGSGRSIPGLHLRDALDLVDKRHPGLILKF
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
GGHAMAAGLSIAAGRQEEFAHAFEAVVRGLIDPADLEGVIETDGELELAEHRYELALELE
CCCHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEHHHHHHHHEEEEH
HAVWGQGFPAPLFTGVFDVAAQRVVGDKHLKLTLARDGNAFEAMRFFQSDPLPERIHAVY
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHH
ALMPNEFNGRRTLQLKLQHWEPAAP
HCCCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]