| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is glpG [C]
Identifier: 74317790
GI number: 74317790
Start: 1871428
End: 1872144
Strand: Direct
Name: glpG [C]
Synonym: Tbd_1772
Alternate gene names: 74317790
Gene position: 1871428-1872144 (Clockwise)
Preceding gene: 74317789
Following gene: 74317820
Centisome position: 64.31
GC content: 64.85
Gene sequence:
>717_bases GTGCCGACGATCGAGCCAGGATCGCCGCGCGACGCTGCGTCGACGGCGTCGCGGCATCCCGCGCCCCCCTTCGCCGACGC CTCAGCTCGCCCTGAACACAAGCTCACGCCGCACTTTCCCCGCATGCCGTCGATCACTTCGCTCCTGATCCTGCTGAACA TCTCGGTCTACGCACTCGCGCTCCTCACCGGGCCCGACATCATCCGCGTGTTCGCACTCTGGCCGCCGGGCTCGGGCGGC GGTTTTTATCTCTGGCAACTGGTCACCTACAGTTTTCTGCACGGCTCATTGCTGCACCTGGGTTTCAACATGCTCGCCAT CTGGATGTTCGGCGCTGCGCTCGAAAAGCGCTGGAACGACCTGCGGTATCTGCTGACCTACCTGCTCAGCGTGATCGTTG CCGCGATGACGCAGATCGCGGTGAGCGGCTATTTTCTGCACGCGACCGGGCCGGTGATCGGCGCGTCGGGTGGCGTGTTC GGCCTGTTGCTCGCTTACGCGCTGTATTTTCCCAATCGGGTGATCAGCGTCGTCTTCCTGCCCTTCATCCAGATTCCGGC GCGCCGCTTCGTTCTGGGCTACGGGCTGGTCGAGCTTTTTCTGGGCGTGACGAACACGGGCCAGGGCGTCGCCCACTTCG CCCACCTCGGCGGTCTCTTCGGCGGCTGGCTGGGGGTGCAGTATTTCCGCGGGCGCGGCGTATTCGGCCAACGCTGA
Upstream 100 bases:
>100_bases CGTCTACGCACTGATGCCCAACGAGTTCAACGGGCGGCGCACGCTTCAGCTCAAACTCCAGCACTGGGAACCTGCAGCCC CGTGAGTGCCCTCAAACCCT
Downstream 100 bases:
>100_bases GGGCGGCACGAGGCCGCCCTCTTGTCGGCGGAATGACAGGGCTTACGCGACCTTGGGCAGGCGCTCGAGCGCGGCCTGGA TCGCCGCTTCGGGATACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Rhomboid-Like Protein; Integral Membrane Protein; Transmembrane Rhomboid Family Protein; S54 Family Peptidase; Rhomboid Protein; Cytoplasmic Membrane Protein; Membrane Serine Protease; Serine Protease; Rhomboid Serine Protease; Membrane Associated Serine Protease
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MPTIEPGSPRDAASTASRHPAPPFADASARPEHKLTPHFPRMPSITSLLILLNISVYALALLTGPDIIRVFALWPPGSGG GFYLWQLVTYSFLHGSLLHLGFNMLAIWMFGAALEKRWNDLRYLLTYLLSVIVAAMTQIAVSGYFLHATGPVIGASGGVF GLLLAYALYFPNRVISVVFLPFIQIPARRFVLGYGLVELFLGVTNTGQGVAHFAHLGGLFGGWLGVQYFRGRGVFGQR
Sequences:
>Translated_238_residues MPTIEPGSPRDAASTASRHPAPPFADASARPEHKLTPHFPRMPSITSLLILLNISVYALALLTGPDIIRVFALWPPGSGG GFYLWQLVTYSFLHGSLLHLGFNMLAIWMFGAALEKRWNDLRYLLTYLLSVIVAAMTQIAVSGYFLHATGPVIGASGGVF GLLLAYALYFPNRVISVVFLPFIQIPARRFVLGYGLVELFLGVTNTGQGVAHFAHLGGLFGGWLGVQYFRGRGVFGQR >Mature_237_residues PTIEPGSPRDAASTASRHPAPPFADASARPEHKLTPHFPRMPSITSLLILLNISVYALALLTGPDIIRVFALWPPGSGGG FYLWQLVTYSFLHGSLLHLGFNMLAIWMFGAALEKRWNDLRYLLTYLLSVIVAAMTQIAVSGYFLHATGPVIGASGGVFG LLLAYALYFPNRVISVVFLPFIQIPARRFVLGYGLVELFLGVTNTGQGVAHFAHLGGLFGGWLGVQYFRGRGVFGQR
Specific function: Not Yet Known. [C]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25918; Mature: 25787
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIEPGSPRDAASTASRHPAPPFADASARPEHKLTPHFPRMPSITSLLILLNISVYALA CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLTGPDIIRVFALWPPGSGGGFYLWQLVTYSFLHGSLLHLGFNMLAIWMFGAALEKRWND HHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRYLLTYLLSVIVAAMTQIAVSGYFLHATGPVIGASGGVFGLLLAYALYFPNRVISVVFL HHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH PFIQIPARRFVLGYGLVELFLGVTNTGQGVAHFAHLGGLFGGWLGVQYFRGRGVFGQR HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PTIEPGSPRDAASTASRHPAPPFADASARPEHKLTPHFPRMPSITSLLILLNISVYALA CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLTGPDIIRVFALWPPGSGGGFYLWQLVTYSFLHGSLLHLGFNMLAIWMFGAALEKRWND HHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRYLLTYLLSVIVAAMTQIAVSGYFLHATGPVIGASGGVFGLLLAYALYFPNRVISVVFL HHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH PFIQIPARRFVLGYGLVELFLGVTNTGQGVAHFAHLGGLFGGWLGVQYFRGRGVFGQR HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA