| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yfjG [C]
Identifier: 74317773
GI number: 74317773
Start: 1846568
End: 1847002
Strand: Reverse
Name: yfjG [C]
Synonym: Tbd_1755
Alternate gene names: 74317773
Gene position: 1847002-1846568 (Counterclockwise)
Preceding gene: 74317776
Following gene: 74317772
Centisome position: 63.48
GC content: 58.85
Gene sequence:
>435_bases ATGGCGCGCGTGGAAAAAAGTGTGCTGGTGGCGCATCCCCCTGAACGCATGTTCGAACTCGTCGATCGGGTCGAGGACTA TCCGGACTTTCTCCCCTGGTGCGGTGGAACAGAACTCAAACATCGTGACGAACATCGCACCGTCGCCACGATACACATCG CCTACATGGGCATACGGCAGAGCTTCACGACGGAAAATCACAAGGTTCACCCGCGCGAGATGCGGATCCGCCTGCAGCAC GGTCCCTTTTCCCATCTCGAAGGCGACTGGCTGTTCCTCCCGCTCGGCGAAGACGCGTGCAAGGTCGACTTCAGACTTGA ATACACCTTCTCCAGCCGCGTGCTCGAAGCGTTGCTGACGCCGGTCTTCGGCCACATCACCAATACCTTCGTCGATGCCT TCGTGCACCGCGCAGACGAGATATACGCCGCATGA
Upstream 100 bases:
>100_bases TCCTCGATGAAGTAATCGTGGAAGGCTTTTTTGTTGTCGGCGATGCTCATGGCGGGTCGGCTTGCGTACAATTCTTGATT TTACAAGGCTTCAGCGATCG
Downstream 100 bases:
>100_bases GCCTGAACGTCGAAGTCGTCTACGCGCTGCCGTCCGAGCAGCCCTTGCTCAACGTCCAGCTGGCCGAGGGCGCGACCGTC GAAGACGCGATCCGCGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MARVEKSVLVAHPPERMFELVDRVEDYPDFLPWCGGTELKHRDEHRTVATIHIAYMGIRQSFTTENHKVHPREMRIRLQH GPFSHLEGDWLFLPLGEDACKVDFRLEYTFSSRVLEALLTPVFGHITNTFVDAFVHRADEIYAA
Sequences:
>Translated_144_residues MARVEKSVLVAHPPERMFELVDRVEDYPDFLPWCGGTELKHRDEHRTVATIHIAYMGIRQSFTTENHKVHPREMRIRLQH GPFSHLEGDWLFLPLGEDACKVDFRLEYTFSSRVLEALLTPVFGHITNTFVDAFVHRADEIYAA >Mature_143_residues ARVEKSVLVAHPPERMFELVDRVEDYPDFLPWCGGTELKHRDEHRTVATIHIAYMGIRQSFTTENHKVHPREMRIRLQHG PFSHLEGDWLFLPLGEDACKVDFRLEYTFSSRVLEALLTPVFGHITNTFVDAFVHRADEIYAA
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=144, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16775; Mature: 16644
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVEKSVLVAHPPERMFELVDRVEDYPDFLPWCGGTELKHRDEHRTVATIHIAYMGIRQ CCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHH SFTTENHKVHPREMRIRLQHGPFSHLEGDWLFLPLGEDACKVDFRLEYTFSSRVLEALLT HCCCCCCCCCHHHHEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEECHHHHHHHHHHH PVFGHITNTFVDAFVHRADEIYAA HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARVEKSVLVAHPPERMFELVDRVEDYPDFLPWCGGTELKHRDEHRTVATIHIAYMGIRQ CCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHH SFTTENHKVHPREMRIRLQHGPFSHLEGDWLFLPLGEDACKVDFRLEYTFSSRVLEALLT HCCCCCCCCCHHHHEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEECHHHHHHHHHHH PVFGHITNTFVDAFVHRADEIYAA HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA