| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ygaV [C]
Identifier: 74317754
GI number: 74317754
Start: 1821747
End: 1822142
Strand: Reverse
Name: ygaV [C]
Synonym: Tbd_1736
Alternate gene names: 74317754
Gene position: 1822142-1821747 (Counterclockwise)
Preceding gene: 74317755
Following gene: 74317753
Centisome position: 62.62
GC content: 67.68
Gene sequence:
>396_bases ATGACCGACCGGGCCAGCCCCGGGCGTTTTGTTTGTTCATTTGATGGCAATCGAAACATGGAAATGAAAGACGTCGTCGC GGCCCTGTCTGCGCTCGCCCAGGCCTCGCGCCTGGCCATCTTCCGCACTCTGGTCGGCGCCGGCCCCGGCGGGCTACCGG CGGGGCGGGTCAGCGAACTGACCGGCATCGCCCCGTCCTCGCTGTCGTTTCATCTGAAGGAACTGAGCCACGCCGGGCTG GCGGCCTCGCGGCAGGACGGGCGCTTCGTCATCTATACGGCGCGCTACGAGACGATGGAGGCATTGCTCGCCTATCTCAC CGCGCACTGCTGCAGCGGCGAAGCCTGCCTGCCGGGGCTTGCGGCCGCGGCCGTCGCTCCCCCTCAAATGGCGTGA
Upstream 100 bases:
>100_bases GCGTGCCGCGGCGACTTTGGCTGTCTGACACAGGTATCAGCCGAAGCCGACAGACGTCGCGCGGGGCCCCGCGCGATACT CGCCGCTTCACGCTTCTTGC
Downstream 100 bases:
>100_bases CACGCCTGGCCCCGCGTGGGCCCCGCGGCGACCTATGATGGAGGAAACCAGTTTCCTCGGGAGTCGCCATGCCCAGCCTG CGTACGATCGTCGCCGCCAC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator; Arsenical Resistance Transcriptional Regulator; ArsR Family Regulatory Protein; ArsR Operon Regulator ArsI; Transcriptional Regulator ArsR Domain; Transcription Regulator ArsR
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSELTGIAPSSLSFHLKELSHAGL AASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGLAAAAVAPPQMA
Sequences:
>Translated_131_residues MTDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSELTGIAPSSLSFHLKELSHAGL AASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGLAAAAVAPPQMA >Mature_130_residues TDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSELTGIAPSSLSFHLKELSHAGLA ASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGLAAAAVAPPQMA
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13599; Mature: 13468
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSEL CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH TGIAPSSLSFHLKELSHAGLAASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGL HCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHH AAAAVAPPQMA HHHHCCCCCCC >Mature Secondary Structure TDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSEL CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH TGIAPSSLSFHLKELSHAGLAASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGL HCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHH AAAAVAPPQMA HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA