Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317755

Identifier: 74317755

GI number: 74317755

Start: 1822358

End: 1824019

Strand: Reverse

Name: 74317755

Synonym: Tbd_1737

Alternate gene names: NA

Gene position: 1824019-1822358 (Counterclockwise)

Preceding gene: 74317756

Following gene: 74317754

Centisome position: 62.69

GC content: 68.77

Gene sequence:

>1662_bases
ATGCTGCGACTGACTGAACTCAAACTCCCGCTCGACCATCCGCCCGCGGCCTTGCGCGCGGCGATCCTGCAGCGGCTCGG
CATCGCCGACGACGAACTTCTCGGCGTCAGCATCTTCAAGCGCAGCTACGACGCGCGCAAGAAGCACGCGCTGCTGCTCG
TCTATGCGGTCGACGTCGAGGTGAGGAACGAGGCCGCGTTGCTGAAGAAATTCCGCAACGACAGCCATCTCGCGCCGACA
CCCGACATGCGCTACCACGTCGTCGGCCACGCGCCGCGGGACCTGGAGGAGCGTCCGATCGTCGTCGGCTTCGGCCCTTG
CGGCATCTTCGCGGCGCTCGTGCTGGCGCAGATGGGTTTTCGGCCGATCGTGCTCGAGCGCGGCAAGGCGGTGCGCGAGC
GCACGCAGGACACTTGGGGCCTGTGGCGCAAGAAGGTGCTCAATCCCGAATCCAACGTGCAGTTCGGCGAGGGCGGGGCG
GGCACCTTCTCCGACGGCAAGCTCTACAGCCAGGTCAAGGACCCCAAGCACTACGGGCGCAAGGTGCTGAGTGAATTCGT
CAAGGCCGGTGCGCCGGAAGAAATCCTCTATGTGTCGAAGCCGCACATCGGCACCTTCCGTCTGGTCGGCATGGTCGAGA
CGATGCGGCGCGAAATCGAAGCGCTCGGCGGCGAGATCCGCTTCCAGCAGCACGTGACCGACCTCGTGCTCGAGGACGGC
GCGGCGGGCCGCCGCATCACCGGCGTCATGCTCGCGAACGGGGAAACGCTTGCGAGCCGTCATGTGGTCCTCGCACTCGG
ACACAGCGCCCGCGACACCTTTTCGATGCTGCACGCGCGCGGCGTGCATATGGAAGCCAAGCCGTTCTCGATCGGCTTTC
GCATCGAGCATCCGCAGTCGCTGATCGACCGCGCGCGGCTCGGGCCCAACGCCGGCAATCCGCTGCTCGGCGCGGCCGAC
TACAAGCTCGTGCACCATGCGACGAACGGCCGCTCGGTCTACAGCTTCTGCATGTGCCCGGGCGGCACCGTCGTCGCCGC
GACCTCGGAGCCGAACTGCGTCGTGACCAACGGCATGAGCCAGTACTCGCGCAACGAGCGCAACGCCAACGCAGGCATCG
TCGTCGGCATCACGCCGGCCGATTTCCCGGGCGACGACCCGCTCGCCGGCATCGCACTGCAGCGGAAGCTGGAGGCCCAC
GCGTTCGCGCTCGGCGGCGGCGACTACAGCGCGCCGGGCCAGCTCGTCGGCGACTTCCTCGCGGGCCGGCCCTCGGCGGC
GCTCGGCAGCGTCGAGCCCTCGTACCAGCCGGGCGTGCGTCTGACCGATCTCGCGACCGCGCTTCCCGACTATGCGATCG
CGGCGATCCGCGAGGCGCTGCCCGCCTTCGACAGGCAGATCAAGGGTTTCGCGATGCAGGACGCGGTGTTGACCGGCGTC
GAGACGCGGACCTCGTCGCCGCTACGCGTCACCCGCGGCGGCGACCTGCAAAGCCTCAACGTGCGCGGCCTGTTCCCGGC
GGGCGAGGGCGCAGGCTACGCGGGTGGCATTCTCTCTGCAGGCATCGACGGCATCCGCGCCGCCGAAGCGGTCGCCCGCG
ATTACCTCGGCCAGGCGCCCGAGGCGCCTGCGCCGACTGCGAGCGCTCCCCTCATCTACTGA

Upstream 100 bases:

>100_bases
CTCGACTGGGAAGCGCCGACTGGCGGCTACCTGCTGAGCGCGTGCTTCGCCACGGGACGCGCCGCGGGGCAGGGCGCCCT
GAATTACCTGAGTACCCTTC

Downstream 100 bases:

>100_bases
CCGCGGCGCCGGCGGCGCGCTCTCGACCGCCGCACGGCGGGGCGCTTTTTCTGCCCCTGTGCCGCGCCGTGCACTTTTCT
CACTCGTGCGCCGCGCCCCG

Product: putative FAD-dependent dehydrogenase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLRLTELKLPLDHPPAALRAAILQRLGIADDELLGVSIFKRSYDARKKHALLLVYAVDVEVRNEAALLKKFRNDSHLAPT
PDMRYHVVGHAPRDLEERPIVVGFGPCGIFAALVLAQMGFRPIVLERGKAVRERTQDTWGLWRKKVLNPESNVQFGEGGA
GTFSDGKLYSQVKDPKHYGRKVLSEFVKAGAPEEILYVSKPHIGTFRLVGMVETMRREIEALGGEIRFQQHVTDLVLEDG
AAGRRITGVMLANGETLASRHVVLALGHSARDTFSMLHARGVHMEAKPFSIGFRIEHPQSLIDRARLGPNAGNPLLGAAD
YKLVHHATNGRSVYSFCMCPGGTVVAATSEPNCVVTNGMSQYSRNERNANAGIVVGITPADFPGDDPLAGIALQRKLEAH
AFALGGGDYSAPGQLVGDFLAGRPSAALGSVEPSYQPGVRLTDLATALPDYAIAAIREALPAFDRQIKGFAMQDAVLTGV
ETRTSSPLRVTRGGDLQSLNVRGLFPAGEGAGYAGGILSAGIDGIRAAEAVARDYLGQAPEAPAPTASAPLIY

Sequences:

>Translated_553_residues
MLRLTELKLPLDHPPAALRAAILQRLGIADDELLGVSIFKRSYDARKKHALLLVYAVDVEVRNEAALLKKFRNDSHLAPT
PDMRYHVVGHAPRDLEERPIVVGFGPCGIFAALVLAQMGFRPIVLERGKAVRERTQDTWGLWRKKVLNPESNVQFGEGGA
GTFSDGKLYSQVKDPKHYGRKVLSEFVKAGAPEEILYVSKPHIGTFRLVGMVETMRREIEALGGEIRFQQHVTDLVLEDG
AAGRRITGVMLANGETLASRHVVLALGHSARDTFSMLHARGVHMEAKPFSIGFRIEHPQSLIDRARLGPNAGNPLLGAAD
YKLVHHATNGRSVYSFCMCPGGTVVAATSEPNCVVTNGMSQYSRNERNANAGIVVGITPADFPGDDPLAGIALQRKLEAH
AFALGGGDYSAPGQLVGDFLAGRPSAALGSVEPSYQPGVRLTDLATALPDYAIAAIREALPAFDRQIKGFAMQDAVLTGV
ETRTSSPLRVTRGGDLQSLNVRGLFPAGEGAGYAGGILSAGIDGIRAAEAVARDYLGQAPEAPAPTASAPLIY
>Mature_553_residues
MLRLTELKLPLDHPPAALRAAILQRLGIADDELLGVSIFKRSYDARKKHALLLVYAVDVEVRNEAALLKKFRNDSHLAPT
PDMRYHVVGHAPRDLEERPIVVGFGPCGIFAALVLAQMGFRPIVLERGKAVRERTQDTWGLWRKKVLNPESNVQFGEGGA
GTFSDGKLYSQVKDPKHYGRKVLSEFVKAGAPEEILYVSKPHIGTFRLVGMVETMRREIEALGGEIRFQQHVTDLVLEDG
AAGRRITGVMLANGETLASRHVVLALGHSARDTFSMLHARGVHMEAKPFSIGFRIEHPQSLIDRARLGPNAGNPLLGAAD
YKLVHHATNGRSVYSFCMCPGGTVVAATSEPNCVVTNGMSQYSRNERNANAGIVVGITPADFPGDDPLAGIALQRKLEAH
AFALGGGDYSAPGQLVGDFLAGRPSAALGSVEPSYQPGVRLTDLATALPDYAIAAIREALPAFDRQIKGFAMQDAVLTGV
ETRTSSPLRVTRGGDLQSLNVRGLFPAGEGAGYAGGILSAGIDGIRAAEAVARDYLGQAPEAPAPTASAPLIY

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 59263; Mature: 59263

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLTELKLPLDHPPAALRAAILQRLGIADDELLGVSIFKRSYDARKKHALLLVYAVDVE
CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEE
VRNEAALLKKFRNDSHLAPTPDMRYHVVGHAPRDLEERPIVVGFGPCGIFAALVLAQMGF
ECHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHCCC
RPIVLERGKAVRERTQDTWGLWRKKVLNPESNVQFGEGGAGTFSDGKLYSQVKDPKHYGR
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHHH
KVLSEFVKAGAPEEILYVSKPHIGTFRLVGMVETMRREIEALGGEIRFQQHVTDLVLEDG
HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCC
AAGRRITGVMLANGETLASRHVVLALGHSARDTFSMLHARGVHMEAKPFSIGFRIEHPQS
CCCCEEEEEEEECCCCHHCCEEEEEECCCCHHHHHHHHHCCCCEECCCEEEEEEECCHHH
LIDRARLGPNAGNPLLGAADYKLVHHATNGRSVYSFCMCPGGTVVAATSEPNCVVTNGMS
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEECCHH
QYSRNERNANAGIVVGITPADFPGDDPLAGIALQRKLEAHAFALGGGDYSAPGQLVGDFL
HHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHH
AGRPSAALGSVEPSYQPGVRLTDLATALPDYAIAAIREALPAFDRQIKGFAMQDAVLTGV
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHCCC
ETRTSSPLRVTRGGDLQSLNVRGLFPAGEGAGYAGGILSAGIDGIRAAEAVARDYLGQAP
CCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCC
EAPAPTASAPLIY
CCCCCCCCCCCCC
>Mature Secondary Structure
MLRLTELKLPLDHPPAALRAAILQRLGIADDELLGVSIFKRSYDARKKHALLLVYAVDVE
CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEE
VRNEAALLKKFRNDSHLAPTPDMRYHVVGHAPRDLEERPIVVGFGPCGIFAALVLAQMGF
ECHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHCCC
RPIVLERGKAVRERTQDTWGLWRKKVLNPESNVQFGEGGAGTFSDGKLYSQVKDPKHYGR
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHHH
KVLSEFVKAGAPEEILYVSKPHIGTFRLVGMVETMRREIEALGGEIRFQQHVTDLVLEDG
HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCC
AAGRRITGVMLANGETLASRHVVLALGHSARDTFSMLHARGVHMEAKPFSIGFRIEHPQS
CCCCEEEEEEEECCCCHHCCEEEEEECCCCHHHHHHHHHCCCCEECCCEEEEEEECCHHH
LIDRARLGPNAGNPLLGAADYKLVHHATNGRSVYSFCMCPGGTVVAATSEPNCVVTNGMS
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEECCHH
QYSRNERNANAGIVVGITPADFPGDDPLAGIALQRKLEAHAFALGGGDYSAPGQLVGDFL
HHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHH
AGRPSAALGSVEPSYQPGVRLTDLATALPDYAIAAIREALPAFDRQIKGFAMQDAVLTGV
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHCCC
ETRTSSPLRVTRGGDLQSLNVRGLFPAGEGAGYAGGILSAGIDGIRAAEAVARDYLGQAP
CCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCC
EAPAPTASAPLIY
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]