| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is uspG [C]
Identifier: 74317753
GI number: 74317753
Start: 1820773
End: 1821678
Strand: Reverse
Name: uspG [C]
Synonym: Tbd_1735
Alternate gene names: 74317753
Gene position: 1821678-1820773 (Counterclockwise)
Preceding gene: 74317754
Following gene: 74317751
Centisome position: 62.6
GC content: 69.87
Gene sequence:
>906_bases ATGCCCAGCCTGCGTACGATCGTCGCCGCCACCGATTTCTCGGACTTCTCGGAGCGCGTCGTGCAGCGCGCGGCGCAGAT CGCCAAACAGCACGGCAGCACGATGCATCTGCTCCATGTCGTGCGGCCACTCGAACTGTATCCGAGCCTGACGCTGACGC AGGACGAATTCAGTCGGCACGACGAGGATTTCCAGGAGGCCGAGCGCACGCGCTTGCAGGCGATCGCGTCGGGCGTCGCC GACACCTTTGGGATAGCCGTCGAGACCGCCACCCGGCTGGGCCGTGCCCACACCGAGATCGGCGCGTATGCCGACGCCGT GTCCGCCGACCTGGTAGTGATCGGAGCGCGCGGTGAGAACACGCTCATGGACCTGTTCCTCGGCTCGACCGCCGCGCGCC TGATGCGGGGCATTCATCATCCGGTCCTCATCGTCCGCAGGCCGGCCACCGACGCCTACGCCAGGGTGCTCGCGGCGGTG GACTTTTCGCCGCTGTCCGCCGACGTCGTGACCTACGCCCTGAGCCTCGCGAGCGGTGCCGAGGTCGAGGCCCTCCACGT CCAGGGCAGCGAGGTCGAGCATCGCCTGCGCCGGGCAAGATACGAGCAGGTCGACATCGCCGACTGGCTCGCGCGCCTGC GCGGAGAGGCCGAACGCCAGCTCGACGCGCTGCTCGCGCCGCTCGAACATGGCGCGTCGGTCGCGCGCCGCGTCGTCGCC GGCTTCCCGCCCGCCGCGCTCTGCCAGTACATCGACGACCATCGCGTCGACCTCGTCGTCCTCGGCCGCCACGGTGAGAG CGCAGGGCTGCACGACTGGCTGCTCGGCAGCGTGAGCCGCGACGTCGCGCTTGCCACGACCGCGGACGTTCTGATGATCG GGCCGGGCGGAAAAGCGGGAGGCTAG
Upstream 100 bases:
>100_bases CCGCGGCCGTCGCTCCCCCTCAAATGGCGTGACACGCCTGGCCCCGCGTGGGCCCCGCGGCGACCTATGATGGAGGAAAC CAGTTTCCTCGGGAGTCGCC
Downstream 100 bases:
>100_bases GGGACGCGGGCAAGAAAAACGCCGCTCGATGAGCGGCGTTTTTTTACGACTGGTGCCGGCGATCGGAATCGAACTGACGA CCTTCGCATTACGAATGCGC
Product: universal stress protein
Products: NA
Alternate protein names: USP MSMEG_3950 [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPSLRTIVAATDFSDFSERVVQRAAQIAKQHGSTMHLLHVVRPLELYPSLTLTQDEFSRHDEDFQEAERTRLQAIASGVA DTFGIAVETATRLGRAHTEIGAYADAVSADLVVIGARGENTLMDLFLGSTAARLMRGIHHPVLIVRRPATDAYARVLAAV DFSPLSADVVTYALSLASGAEVEALHVQGSEVEHRLRRARYEQVDIADWLARLRGEAERQLDALLAPLEHGASVARRVVA GFPPAALCQYIDDHRVDLVVLGRHGESAGLHDWLLGSVSRDVALATTADVLMIGPGGKAGG
Sequences:
>Translated_301_residues MPSLRTIVAATDFSDFSERVVQRAAQIAKQHGSTMHLLHVVRPLELYPSLTLTQDEFSRHDEDFQEAERTRLQAIASGVA DTFGIAVETATRLGRAHTEIGAYADAVSADLVVIGARGENTLMDLFLGSTAARLMRGIHHPVLIVRRPATDAYARVLAAV DFSPLSADVVTYALSLASGAEVEALHVQGSEVEHRLRRARYEQVDIADWLARLRGEAERQLDALLAPLEHGASVARRVVA GFPPAALCQYIDDHRVDLVVLGRHGESAGLHDWLLGSVSRDVALATTADVLMIGPGGKAGG >Mature_300_residues PSLRTIVAATDFSDFSERVVQRAAQIAKQHGSTMHLLHVVRPLELYPSLTLTQDEFSRHDEDFQEAERTRLQAIASGVAD TFGIAVETATRLGRAHTEIGAYADAVSADLVVIGARGENTLMDLFLGSTAARLMRGIHHPVLIVRRPATDAYARVLAAVD FSPLSADVVTYALSLASGAEVEALHVQGSEVEHRLRRARYEQVDIADWLARLRGEAERQLDALLAPLEHGASVARRVVAG FPPAALCQYIDDHRVDLVVLGRHGESAGLHDWLLGSVSRDVALATTADVLMIGPGGKAGG
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: 180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 32446; Mature: 32315
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLRTIVAATDFSDFSERVVQRAAQIAKQHGSTMHLLHVVRPLELYPSLTLTQDEFSRH CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECHHHHHCC DEDFQEAERTRLQAIASGVADTFGIAVETATRLGRAHTEIGAYADAVSADLVVIGARGEN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC TLMDLFLGSTAARLMRGIHHPVLIVRRPATDAYARVLAAVDFSPLSADVVTYALSLASGA HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC EVEALHVQGSEVEHRLRRARYEQVDIADWLARLRGEAERQLDALLAPLEHGASVARRVVA CEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH GFPPAALCQYIDDHRVDLVVLGRHGESAGLHDWLLGSVSRDVALATTADVLMIGPGGKAG CCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCEEEECCCCCCC G C >Mature Secondary Structure PSLRTIVAATDFSDFSERVVQRAAQIAKQHGSTMHLLHVVRPLELYPSLTLTQDEFSRH CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECHHHHHCC DEDFQEAERTRLQAIASGVADTFGIAVETATRLGRAHTEIGAYADAVSADLVVIGARGEN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC TLMDLFLGSTAARLMRGIHHPVLIVRRPATDAYARVLAAVDFSPLSADVVTYALSLASGA HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC EVEALHVQGSEVEHRLRRARYEQVDIADWLARLRGEAERQLDALLAPLEHGASVARRVVA CEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH GFPPAALCQYIDDHRVDLVVLGRHGESAGLHDWLLGSVSRDVALATTADVLMIGPGGKAG CCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCEEEECCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA