Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is ygaV [C]

Identifier: 74317754

GI number: 74317754

Start: 1821747

End: 1822142

Strand: Reverse

Name: ygaV [C]

Synonym: Tbd_1736

Alternate gene names: 74317754

Gene position: 1822142-1821747 (Counterclockwise)

Preceding gene: 74317755

Following gene: 74317753

Centisome position: 62.62

GC content: 67.68

Gene sequence:

>396_bases
ATGACCGACCGGGCCAGCCCCGGGCGTTTTGTTTGTTCATTTGATGGCAATCGAAACATGGAAATGAAAGACGTCGTCGC
GGCCCTGTCTGCGCTCGCCCAGGCCTCGCGCCTGGCCATCTTCCGCACTCTGGTCGGCGCCGGCCCCGGCGGGCTACCGG
CGGGGCGGGTCAGCGAACTGACCGGCATCGCCCCGTCCTCGCTGTCGTTTCATCTGAAGGAACTGAGCCACGCCGGGCTG
GCGGCCTCGCGGCAGGACGGGCGCTTCGTCATCTATACGGCGCGCTACGAGACGATGGAGGCATTGCTCGCCTATCTCAC
CGCGCACTGCTGCAGCGGCGAAGCCTGCCTGCCGGGGCTTGCGGCCGCGGCCGTCGCTCCCCCTCAAATGGCGTGA

Upstream 100 bases:

>100_bases
GCGTGCCGCGGCGACTTTGGCTGTCTGACACAGGTATCAGCCGAAGCCGACAGACGTCGCGCGGGGCCCCGCGCGATACT
CGCCGCTTCACGCTTCTTGC

Downstream 100 bases:

>100_bases
CACGCCTGGCCCCGCGTGGGCCCCGCGGCGACCTATGATGGAGGAAACCAGTTTCCTCGGGAGTCGCCATGCCCAGCCTG
CGTACGATCGTCGCCGCCAC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator; Arsenical Resistance Transcriptional Regulator; ArsR Family Regulatory Protein; ArsR Operon Regulator ArsI; Transcriptional Regulator ArsR Domain; Transcription Regulator ArsR

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSELTGIAPSSLSFHLKELSHAGL
AASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGLAAAAVAPPQMA

Sequences:

>Translated_131_residues
MTDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSELTGIAPSSLSFHLKELSHAGL
AASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGLAAAAVAPPQMA
>Mature_130_residues
TDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSELTGIAPSSLSFHLKELSHAGLA
ASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGLAAAAVAPPQMA

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13599; Mature: 13468

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSEL
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
TGIAPSSLSFHLKELSHAGLAASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGL
HCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHH
AAAAVAPPQMA
HHHHCCCCCCC
>Mature Secondary Structure 
TDRASPGRFVCSFDGNRNMEMKDVVAALSALAQASRLAIFRTLVGAGPGGLPAGRVSEL
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
TGIAPSSLSFHLKELSHAGLAASRQDGRFVIYTARYETMEALLAYLTAHCCSGEACLPGL
HCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHH
AAAAVAPPQMA
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA