Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317750

Identifier: 74317750

GI number: 74317750

Start: 1815801

End: 1817312

Strand: Reverse

Name: 74317750

Synonym: Tbd_1732

Alternate gene names: NA

Gene position: 1817312-1815801 (Counterclockwise)

Preceding gene: 74317751

Following gene: 74317749

Centisome position: 62.45

GC content: 71.43

Gene sequence:

>1512_bases
ATGGACACGCTGCAGAGTTACGACGAACTGCCCTACGACAGCCTGCCGCTGCCCGAGACCCAGCCGGATTTCCTCGCCGC
CCTGGCGCGGCTGCACGGCTTCGACGCGCCCGATCCGACGTGCGCCCGCATCCTCGAACTGGGGTGTGCCAGCGGCGGCA
ACCTGATTCCGCTCGCCTGGCGCTGGCCCGCGTCGCAGTGCGTCGGCATCGAACTCTCGCGCGTCCAGGCCGAGGCGGGC
GCTGAATTCATTCGTGCGCTCGGCCTGTCGAACGTCCGCATCGTGCATGGCGATCTGGCGGCGCTGTCCGCGGACCTCGG
CGAATTCGATTACATCATCGCGCACGGCGTGTTTTCCTGGGTGCCCCCGGCCGTGCAGGAGGCCCTGCTCGAACTCTGCC
GGCGCCACCTCGCCCCGCGCGGCATCGCCTACATCAGCTTCAACGTCGCCGCGGGCTGGCGGTCGCTCGAGCCGCTGCGG
GCCGCGCTGCTTGCGCGGACCGGCGCCGACCAGCCTGCGCCGGCGCGTTACGAGGCGGCGCTGCGGGTACTCGACGAACT
CGAGGCGCAATGGACCGACCCCGCGTTGCTGAAGGAGATCGCCTACCTCCGCACGGCCGCGCCCTCCTATCTGTTCCATG
AATACCTGGCCGAATTCAATGCGCCGCTCGAGTTCGGCCGGTTTGACGCGGCGCTTGCCGCACACGCCTTGCGCTACGTC
GGCGAAGCCGGGCCGCGTCACGCGGTGGTCGAATTCGACGACGGAGGCGAAGCGGACGCACGCCGCCGGGCCGAGCGCTG
GCGCGACGCCGAGGCGGCGCTCGACGCCGCGCTGGCGACGCGGTTTCGCCGCGCCCTCATCGCGCGTGCCGATGCACCCG
CCGACCCGCATCCCGCGCGCGCGGACGCCTTGCGCGAACTCGCCTTTTACGCCGACCTGCGCTGCGACGAGGAGATCGAT
CTCGAGCAGGCGACCGAGCAGGCCTTCCTCAACCCGGCGGGCAACACTTTCCGCGTCGCGCCGCCCGTGATGAAGGCCGC
GCTCATGGTCCTGTCGGCGCGCTATCCGGCCGCGCTGACCTATGCCGATCTGCAGGCCGCCGCCGGTTCGGTCATGGTCG
ACTGCGGCGTCGTCGCCGAGGTCGACGACGGGGCGTTCCGCACGGCGCTGTTTCAGCTCGTGATGGCTCATGCCGTCATG
CCAACGCCGAGTGCGGGGCCGGTGGTCATCGACCCCGGTTCGCACCCGCGCGCGAACGCGCTCGCCCGCCTGCAGGCGCG
TTCGCCGGGCTGGGTCGTGAGCGGCCGCCGCCACGTCGCGATTGATCTCGACGCGGCCGGGCGCGCGCTGCTCGCACTGC
TCGACGGCAACCGTGCGCTGCCCGAGCTGAGCGCTGCCATGCAGGCCTGGCTCGCCGCGGCCGGCGTCGACCTGCCGGAA
GCGGCCGTCAATGAACTCACGGCACGCCAGCTCTGGCTGTTCGCCCGTCAGGGCCTGCTCGAGGAAACGTGA

Upstream 100 bases:

>100_bases
GGCCCAGCCGCGCAAGCCGCGGCCGCAGGCGGCGCTGTTCTCGGCCAAGCCCGGTTCGCGCGGGCACTGAGCGCGCCACC
CGGCCGCTACAATCGGCGCG

Downstream 100 bases:

>100_bases
TCGGCAGTTCGCCGGCACGCATGCCGGCGCATGGCCGGTCGTTTGCTATCGTTGGAGCAGGATTTTTTATCTGGACCGAC
GATGGCGAACGTTCTCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MDTLQSYDELPYDSLPLPETQPDFLAALARLHGFDAPDPTCARILELGCASGGNLIPLAWRWPASQCVGIELSRVQAEAG
AEFIRALGLSNVRIVHGDLAALSADLGEFDYIIAHGVFSWVPPAVQEALLELCRRHLAPRGIAYISFNVAAGWRSLEPLR
AALLARTGADQPAPARYEAALRVLDELEAQWTDPALLKEIAYLRTAAPSYLFHEYLAEFNAPLEFGRFDAALAAHALRYV
GEAGPRHAVVEFDDGGEADARRRAERWRDAEAALDAALATRFRRALIARADAPADPHPARADALRELAFYADLRCDEEID
LEQATEQAFLNPAGNTFRVAPPVMKAALMVLSARYPAALTYADLQAAAGSVMVDCGVVAEVDDGAFRTALFQLVMAHAVM
PTPSAGPVVIDPGSHPRANALARLQARSPGWVVSGRRHVAIDLDAAGRALLALLDGNRALPELSAAMQAWLAAAGVDLPE
AAVNELTARQLWLFARQGLLEET

Sequences:

>Translated_503_residues
MDTLQSYDELPYDSLPLPETQPDFLAALARLHGFDAPDPTCARILELGCASGGNLIPLAWRWPASQCVGIELSRVQAEAG
AEFIRALGLSNVRIVHGDLAALSADLGEFDYIIAHGVFSWVPPAVQEALLELCRRHLAPRGIAYISFNVAAGWRSLEPLR
AALLARTGADQPAPARYEAALRVLDELEAQWTDPALLKEIAYLRTAAPSYLFHEYLAEFNAPLEFGRFDAALAAHALRYV
GEAGPRHAVVEFDDGGEADARRRAERWRDAEAALDAALATRFRRALIARADAPADPHPARADALRELAFYADLRCDEEID
LEQATEQAFLNPAGNTFRVAPPVMKAALMVLSARYPAALTYADLQAAAGSVMVDCGVVAEVDDGAFRTALFQLVMAHAVM
PTPSAGPVVIDPGSHPRANALARLQARSPGWVVSGRRHVAIDLDAAGRALLALLDGNRALPELSAAMQAWLAAAGVDLPE
AAVNELTARQLWLFARQGLLEET
>Mature_503_residues
MDTLQSYDELPYDSLPLPETQPDFLAALARLHGFDAPDPTCARILELGCASGGNLIPLAWRWPASQCVGIELSRVQAEAG
AEFIRALGLSNVRIVHGDLAALSADLGEFDYIIAHGVFSWVPPAVQEALLELCRRHLAPRGIAYISFNVAAGWRSLEPLR
AALLARTGADQPAPARYEAALRVLDELEAQWTDPALLKEIAYLRTAAPSYLFHEYLAEFNAPLEFGRFDAALAAHALRYV
GEAGPRHAVVEFDDGGEADARRRAERWRDAEAALDAALATRFRRALIARADAPADPHPARADALRELAFYADLRCDEEID
LEQATEQAFLNPAGNTFRVAPPVMKAALMVLSARYPAALTYADLQAAAGSVMVDCGVVAEVDDGAFRTALFQLVMAHAVM
PTPSAGPVVIDPGSHPRANALARLQARSPGWVVSGRRHVAIDLDAAGRALLALLDGNRALPELSAAMQAWLAAAGVDLPE
AAVNELTARQLWLFARQGLLEET

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013217
- InterPro:   IPR018773 [H]

Pfam domain/function: PF08242 Methyltransf_12; PF10119 MethyTransf_Reg [H]

EC number: NA

Molecular weight: Translated: 54248; Mature: 54248

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLQSYDELPYDSLPLPETQPDFLAALARLHGFDAPDPTCARILELGCASGGNLIPLAW
CCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEE
RWPASQCVGIELSRVQAEAGAEFIRALGLSNVRIVHGDLAALSADLGEFDYIIAHGVFSW
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHH
VPPAVQEALLELCRRHLAPRGIAYISFNVAAGWRSLEPLRAALLARTGADQPAPARYEAA
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
LRVLDELEAQWTDPALLKEIAYLRTAAPSYLFHEYLAEFNAPLEFGRFDAALAAHALRYV
HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHH
GEAGPRHAVVEFDDGGEADARRRAERWRDAEAALDAALATRFRRALIARADAPADPHPAR
HCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ADALRELAFYADLRCDEEIDLEQATEQAFLNPAGNTFRVAPPVMKAALMVLSARYPAALT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCEE
YADLQAAAGSVMVDCGVVAEVDDGAFRTALFQLVMAHAVMPTPSAGPVVIDPGSHPRANA
HHHHHHHCCCEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHH
LARLQARSPGWVVSGRRHVAIDLDAAGRALLALLDGNRALPELSAAMQAWLAAAGVDLPE
HHHHHCCCCCEEECCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCH
AAVNELTARQLWLFARQGLLEET
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTLQSYDELPYDSLPLPETQPDFLAALARLHGFDAPDPTCARILELGCASGGNLIPLAW
CCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEE
RWPASQCVGIELSRVQAEAGAEFIRALGLSNVRIVHGDLAALSADLGEFDYIIAHGVFSW
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHH
VPPAVQEALLELCRRHLAPRGIAYISFNVAAGWRSLEPLRAALLARTGADQPAPARYEAA
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
LRVLDELEAQWTDPALLKEIAYLRTAAPSYLFHEYLAEFNAPLEFGRFDAALAAHALRYV
HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHH
GEAGPRHAVVEFDDGGEADARRRAERWRDAEAALDAALATRFRRALIARADAPADPHPAR
HCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ADALRELAFYADLRCDEEIDLEQATEQAFLNPAGNTFRVAPPVMKAALMVLSARYPAALT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCEE
YADLQAAAGSVMVDCGVVAEVDDGAFRTALFQLVMAHAVMPTPSAGPVVIDPGSHPRANA
HHHHHHHCCCEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHH
LARLQARSPGWVVSGRRHVAIDLDAAGRALLALLDGNRALPELSAAMQAWLAAAGVDLPE
HHHHHCCCCCEEECCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCH
AAVNELTARQLWLFARQGLLEET
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9823893; 9274032 [H]