| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is nfnB [C]
Identifier: 74317749
GI number: 74317749
Start: 1815132
End: 1815770
Strand: Reverse
Name: nfnB [C]
Synonym: Tbd_1731
Alternate gene names: 74317749
Gene position: 1815770-1815132 (Counterclockwise)
Preceding gene: 74317750
Following gene: 74317745
Centisome position: 62.4
GC content: 68.39
Gene sequence:
>639_bases ATGGCCGGTCGTTTGCTATCGTTGGAGCAGGATTTTTTATCTGGACCGACGATGGCGAACGTTCTCGGCGCGATTCAGCA GCGCTACGCCTGCCGGCGTTTCGTCGCCGGGAGGCCGCCATCCGATGACGAACTGGTGTCGTTGATCGAGGCGGCGCGGC TTGCGCCTTCTGCCTTCGGTCTCGAACCCTGGCGTTTCCTCACGGTTATCGATGCGGCGCAGCGCGCCGAACTCGCGCGC GCATGCTTCGGCCAGCCCGCCGCCGCGACGGCTCCGGCGTTCATCACCATCGTCGCGCTCGTCGATGCTCTCGAACCCGA CTCGGATTACGTACGTGCGCGTTTCGAAGCCGAGGCGCGCGGCGGTCCGGTCGCGCCGCTACACGAAATGTACCGCGCCT TTTACCGGGCCGAGGCGATCGCCGCCTGGGCGCAAGGCCAGTGCCACTTCGCCGCCGCGCACCTGCTGTTGCAGGCCGCG CACCTCGGGCTCGGCAGCTGCCCGATCGGCGGGTTCGACGCGGCTGCCCTCGCACGCGCTTTGCGTCTTCCGCCCGGCGA GACGCCGGCGCTCGTGATCGCGCTCGGTCACTGCGCCGACACGATGCCGAAGCGCGTGCGAAAACCGCGCGCGGATTGA
Upstream 100 bases:
>100_bases GGCCGTCAATGAACTCACGGCACGCCAGCTCTGGCTGTTCGCCCGTCAGGGCCTGCTCGAGGAAACGTGATCGGCAGTTC GCCGGCACGCATGCCGGCGC
Downstream 100 bases:
>100_bases CGGTCCGCTAGCGCGGCGCCTCCCAGCAGTTGTTGCTGACCTGCCAGGTCATCGAGAGCTGTTCGCTGGTCGGATAGAGG ACGTATTTGACGCCGAGGTA
Product: NAD(P)H-flavin oxidoreductase
Products: NAD(P)(+); @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MAGRLLSLEQDFLSGPTMANVLGAIQQRYACRRFVAGRPPSDDELVSLIEAARLAPSAFGLEPWRFLTVIDAAQRAELAR ACFGQPAAATAPAFITIVALVDALEPDSDYVRARFEAEARGGPVAPLHEMYRAFYRAEAIAAWAQGQCHFAAAHLLLQAA HLGLGSCPIGGFDAAALARALRLPPGETPALVIALGHCADTMPKRVRKPRAD
Sequences:
>Translated_212_residues MAGRLLSLEQDFLSGPTMANVLGAIQQRYACRRFVAGRPPSDDELVSLIEAARLAPSAFGLEPWRFLTVIDAAQRAELAR ACFGQPAAATAPAFITIVALVDALEPDSDYVRARFEAEARGGPVAPLHEMYRAFYRAEAIAAWAQGQCHFAAAHLLLQAA HLGLGSCPIGGFDAAALARALRLPPGETPALVIALGHCADTMPKRVRKPRAD >Mature_211_residues AGRLLSLEQDFLSGPTMANVLGAIQQRYACRRFVAGRPPSDDELVSLIEAARLAPSAFGLEPWRFLTVIDAAQRAELARA CFGQPAAATAPAFITIVALVDALEPDSDYVRARFEAEARGGPVAPLHEMYRAFYRAEAIAAWAQGQCHFAAAHLLLQAAH LGLGSCPIGGFDAAALARALRLPPGETPALVIALGHCADTMPKRVRKPRAD
Specific function: Reduction Of A Variety Of Nitroaromatic Compounds Using NADH (And To Lesser Extent Nadph) As Source Of Reducing Equivalents; Two Electrons Are Transferred. Capable Of Reducing Nitrofurazone, Quinones And The Anti-Tumor Agent Cb1954 (5- (Aziridin-1-Yl)-2,4
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 22612; Mature: 22481
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRLLSLEQDFLSGPTMANVLGAIQQRYACRRFVAGRPPSDDELVSLIEAARLAPSAFG CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHCC LEPWRFLTVIDAAQRAELARACFGQPAAATAPAFITIVALVDALEPDSDYVRARFEAEAR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC GGPVAPLHEMYRAFYRAEAIAAWAQGQCHFAAAHLLLQAAHLGLGSCPIGGFDAAALARA CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LRLPPGETPALVIALGHCADTMPKRVRKPRAD HCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCC >Mature Secondary Structure AGRLLSLEQDFLSGPTMANVLGAIQQRYACRRFVAGRPPSDDELVSLIEAARLAPSAFG CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHCC LEPWRFLTVIDAAQRAELARACFGQPAAATAPAFITIVALVDALEPDSDYVRARFEAEAR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC GGPVAPLHEMYRAFYRAEAIAAWAQGQCHFAAAHLLLQAAHLGLGSCPIGGFDAAALARA CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LRLPPGETPALVIALGHCADTMPKRVRKPRAD HCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NAD(P)H; 6,7-Dihydropteridine [C]
Specific reaction: NAD(P)H + 6,7-Dihydropteridine = NAD(P)(+) + @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA