| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is hisI
Identifier: 74317725
GI number: 74317725
Start: 1796154
End: 1796555
Strand: Reverse
Name: hisI
Synonym: Tbd_1707
Alternate gene names: 74317725
Gene position: 1796555-1796154 (Counterclockwise)
Preceding gene: 74317726
Following gene: 74317724
Centisome position: 61.74
GC content: 62.69
Gene sequence:
>402_bases GTGAGCGACTGGCTCGACGCGGTGAAATGGGACGCCCAGGGCCTCGTCCCGGCGATCGCCCAGGATGCGGCGAGCGGGGA AATCCTCATGGTGGCGTGGATGAATCGGGAAGCGCTCGAGGAAACCGCGCGCACCGGCCGCGGCGTCTATTTTTCCCGCT CCCGCCACAAGCTGTGGCGCAAGGGCGAGGAATCGGGTCACGTCCAGACGGTCAGCGAAATCCGTCTCGACTGCGACAAC GACGTCATTCTGCTCAAGATCGAACAATTGGGAGGCATCGCCTGTCATACGGGACGACGCTCGTGTTTCTTCCACAAGCT CACGACCGATGATCGGGGCCACGCGGACTGGGTGGCGACCGAGCCGGTGTTGAAGAATCCTGACGAGATCTACCGCAGAT GA
Upstream 100 bases:
>100_bases GGGCCGATGCCGTCCTCGCCGCGAGCATTTTTCATTTCGGCGAATACCGGGTCGACGAGGCCAAGGCCTACATGAAGCGG CACGGAATCGAGGTGCGCCT
Downstream 100 bases:
>100_bases GCGATATCCTCGACCGCCTGGCGGAAATCCTCGAGGCGCGCAAGCAGGCCTCGCCGGACGCTTCCTACGTCGCCCGACTC TATGCCAAGGGCACCGACGC
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSDWLDAVKWDAQGLVPAIAQDAASGEILMVAWMNREALEETARTGRGVYFSRSRHKLWRKGEESGHVQTVSEIRLDCDN DVILLKIEQLGGIACHTGRRSCFFHKLTTDDRGHADWVATEPVLKNPDEIYRR
Sequences:
>Translated_133_residues MSDWLDAVKWDAQGLVPAIAQDAASGEILMVAWMNREALEETARTGRGVYFSRSRHKLWRKGEESGHVQTVSEIRLDCDN DVILLKIEQLGGIACHTGRRSCFFHKLTTDDRGHADWVATEPVLKNPDEIYRR >Mature_132_residues SDWLDAVKWDAQGLVPAIAQDAASGEILMVAWMNREALEETARTGRGVYFSRSRHKLWRKGEESGHVQTVSEIRLDCDND VILLKIEQLGGIACHTGRRSCFFHKLTTDDRGHADWVATEPVLKNPDEIYRR
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=90, Percent_Identity=47.7777777777778, Blast_Score=96, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6319819, Length=75, Percent_Identity=38.6666666666667, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS3_THIDA (Q3SEU9)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315465.1 - ProteinModelPortal: Q3SEU9 - SMR: Q3SEU9 - STRING: Q3SEU9 - GeneID: 3671290 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1707 - NMPDR: fig|292415.3.peg.1804 - eggNOG: COG0139 - HOGENOM: HBG294308 - OMA: LWLKGES - BioCyc: TDEN292415:TBD_1707-MONOMER - GO: GO:0005737 - HAMAP: MF_01021 - InterPro: IPR002496 - ProDom: PD002610
Pfam domain/function: PF01502 PRA-CH
EC number: =3.5.4.19
Molecular weight: Translated: 15122; Mature: 14991
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDWLDAVKWDAQGLVPAIAQDAASGEILMVAWMNREALEETARTGRGVYFSRSRHKLWR CCCHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCEEEECHHHHHHH KGEESGHVQTVSEIRLDCDNDVILLKIEQLGGIACHTGRRSCFFHKLTTDDRGHADWVAT CCCCCCCEEEHHHEEECCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCEEEC EPVLKNPDEIYRR CCCCCCHHHHHCC >Mature Secondary Structure SDWLDAVKWDAQGLVPAIAQDAASGEILMVAWMNREALEETARTGRGVYFSRSRHKLWR CCHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCEEEECHHHHHHH KGEESGHVQTVSEIRLDCDNDVILLKIEQLGGIACHTGRRSCFFHKLTTDDRGHADWVAT CCCCCCCEEEHHHEEECCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCEEEC EPVLKNPDEIYRR CCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA