| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317698
Identifier: 74317698
GI number: 74317698
Start: 1768523
End: 1769005
Strand: Reverse
Name: 74317698
Synonym: Tbd_1680
Alternate gene names: NA
Gene position: 1769005-1768523 (Counterclockwise)
Preceding gene: 74317700
Following gene: 74317696
Centisome position: 60.79
GC content: 57.14
Gene sequence:
>483_bases GTGGCGGGCAAGGCTCACCCTGCCAATTGCCGAGTGCCCGAATACTTGGCAGGCTACCGTCTGCATTTCGCCCCATCCAG GAGGAGGACCACCGTGCCGTTCGATCCATCCCAGTATTTGCTGCCCGTAGATGTTGCGACCGGCGCGCCGACCTCACAGG AGGGCATGCTCCTCCTCGCCTATCGCGGTATTGGCGTTATCGCAGGTCAGGGCAAAGGCGCGTATTTGACGCTTGCGAAT GCCATTCGCTGGAATGAAATGGAAGCTGAGGATTCAGATGGATTTGAAAAGAAGTTCCGGGAATCGCTGGCGGATGAACT GAAGAAAATTCAAAGCGAGGACGAGAACTTTGTGTACTCGGCAGAGCTGAGGTTCCTTTGGAGCAAGGTCTTCCCAGAGG CGGCGCGCGCCCTTCTGAAGTCGAAAAGTAGCAAGGTGGAGCCGAAGGTTAGGGAGGCCATTCGCAGTGCTCTCGAGCCC TGA
Upstream 100 bases:
>100_bases TCCGCTGCCATGGCTCAAAATCTCGCTGCTCCCGCCGACAGGCGGAACACGCCGAAGGCGCCCCTAAAGTCCCAGCTTTT GACTTGCCACGCCGACAGGC
Downstream 100 bases:
>100_bases CGCGACACCTTTCTAACCCAGCTTCTTCGCCAGATCCTCGGCCCGTAGGTGCGTGTACCGTTTGAGCATTTGTAAGGTCT TGTGACCGGTGATGCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MAGKAHPANCRVPEYLAGYRLHFAPSRRRTTVPFDPSQYLLPVDVATGAPTSQEGMLLLAYRGIGVIAGQGKGAYLTLAN AIRWNEMEAEDSDGFEKKFRESLADELKKIQSEDENFVYSAELRFLWSKVFPEAARALLKSKSSKVEPKVREAIRSALEP
Sequences:
>Translated_160_residues MAGKAHPANCRVPEYLAGYRLHFAPSRRRTTVPFDPSQYLLPVDVATGAPTSQEGMLLLAYRGIGVIAGQGKGAYLTLAN AIRWNEMEAEDSDGFEKKFRESLADELKKIQSEDENFVYSAELRFLWSKVFPEAARALLKSKSSKVEPKVREAIRSALEP >Mature_159_residues AGKAHPANCRVPEYLAGYRLHFAPSRRRTTVPFDPSQYLLPVDVATGAPTSQEGMLLLAYRGIGVIAGQGKGAYLTLANA IRWNEMEAEDSDGFEKKFRESLADELKKIQSEDENFVYSAELRFLWSKVFPEAARALLKSKSSKVEPKVREAIRSALEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17834; Mature: 17702
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKAHPANCRVPEYLAGYRLHFAPSRRRTTVPFDPSQYLLPVDVATGAPTSQEGMLLLA CCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE YRGIGVIAGQGKGAYLTLANAIRWNEMEAEDSDGFEKKFRESLADELKKIQSEDENFVYS ECCCEEEEECCCCEEEEEECHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEH AELRFLWSKVFPEAARALLKSKSSKVEPKVREAIRSALEP HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AGKAHPANCRVPEYLAGYRLHFAPSRRRTTVPFDPSQYLLPVDVATGAPTSQEGMLLLA CCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE YRGIGVIAGQGKGAYLTLANAIRWNEMEAEDSDGFEKKFRESLADELKKIQSEDENFVYS ECCCEEEEECCCCEEEEEECHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEH AELRFLWSKVFPEAARALLKSKSSKVEPKVREAIRSALEP HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA