| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317677
Identifier: 74317677
GI number: 74317677
Start: 1743511
End: 1743738
Strand: Direct
Name: 74317677
Synonym: Tbd_1659
Alternate gene names: NA
Gene position: 1743511-1743738 (Clockwise)
Preceding gene: 74317676
Following gene: 74317683
Centisome position: 59.92
GC content: 65.79
Gene sequence:
>228_bases ATGAACCGAGGAGCCGGCATGAACGAGATCGTCCTACCCGTAAACGGAATGACCTGCGGCGGCTGTGTCAGCAGTGTGCA AAAGGTGCTGTCCGCGCTGCCCGGGGTGGCGAGTGTGGAAGTGAGCTTGACGCCCGGCCAGGCGCGCGTCGTCTACGACG CCGCCAAAGTGGATCGCGCTGCCATGGCCCAGGCGGTCGTCGACGCCGGTTTCAGCGTCGGCGAGTGA
Upstream 100 bases:
>100_bases CAAGCGCCCGCGCAAGAAATAACGCCATTTTCCGGCACGCCCCCGCCCGCGACGCTCGCGGGCTTTTCTTTTTCCGCTGG CATAAAATCCCCGTTCTGCA
Downstream 100 bases:
>100_bases GGCGCGGTCCCACTCAATCCCGCGCGCACAAGGTGTCGATCGGCTCAGGGCGGCGCACGGCGCTGCCCTGTGCGTAATCG ACGCCGATCTCGCGCAACAG
Product: copper ion binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MNRGAGMNEIVLPVNGMTCGGCVSSVQKVLSALPGVASVEVSLTPGQARVVYDAAKVDRAAMAQAVVDAGFSVGE
Sequences:
>Translated_75_residues MNRGAGMNEIVLPVNGMTCGGCVSSVQKVLSALPGVASVEVSLTPGQARVVYDAAKVDRAAMAQAVVDAGFSVGE >Mature_75_residues MNRGAGMNEIVLPVNGMTCGGCVSSVQKVLSALPGVASVEVSLTPGQARVVYDAAKVDRAAMAQAVVDAGFSVGE
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7509; Mature: 7509
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRGAGMNEIVLPVNGMTCGGCVSSVQKVLSALPGVASVEVSLTPGQARVVYDAAKVDRA CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHH AMAQAVVDAGFSVGE HHHHHHHHCCCCCCC >Mature Secondary Structure MNRGAGMNEIVLPVNGMTCGGCVSSVQKVLSALPGVASVEVSLTPGQARVVYDAAKVDRA CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHH AMAQAVVDAGFSVGE HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA