| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is gloB
Identifier: 74317683
GI number: 74317683
Start: 1748707
End: 1749477
Strand: Direct
Name: gloB
Synonym: Tbd_1665
Alternate gene names: 74317683
Gene position: 1748707-1749477 (Clockwise)
Preceding gene: 74317677
Following gene: 74317684
Centisome position: 60.1
GC content: 67.06
Gene sequence:
>771_bases ATGTTGACGCTGATTCCCCTGCCCGCGTTCGAGGACAACTACATCTGGGTGTGGCACGACGCGAAATACGCGGTCGCGGT CGACCCCGGTGACCCTGCCGTGCTTTCGACCTATCTCGACAGCCGCGGACTCGCCCTCGCCGCGGTGCTCGTGACCCACC ATCACCGCGACCATACTGGCGGCAACACCTGGCTGCGTCAACGCTATAACTGTGCCATCTACGCGCCCGACAACCCCCGT ATCCCGGCGGTCAGTCATGTCGTGCGCGGCGGCGATTCGGTGGCGGTTCCCGAACTCGGCCTCGCGCTCGCCGTGCTCGC GACGCCCGGCCATACGCTCGACCACGTCAGCTACGTCGGCAACGGGCATCTCTTCTGCGGTGATACGCTCTTCGGCTGCG GTTGCGGCAAGCTGTTCGAGGGCGACGCAGCGATGATGTCGGCGAGTCTCGATGCGCTCGCCGCCTTGCCGCCCACAACG CGCGTCTGCTGCGCGCACGAATATACCCTCAGCAACATCGACTTTGCCAAAACCATCGACGGCGCGAACCCCGCCCTGCT CGAACGCGAGCGCATCGACCGCGCCGCACGCGCCCAAAACCGGCCGACCCTGCCGTCGACGCTCGCGCTCGAACGCACGA CGAACCCGTTTTTGCGCTTCCACGACGCCGACATGCGCGCTTTCGCGGTCGGCGAACTCGGCAGCCCGGATCCGGGTCCC GCCACGGTCTTCGGCGCGATCCGTGCGGCCAAGGACCGGTGGGACGGTTGA
Upstream 100 bases:
>100_bases GCTGCTCGCGGAAGAGCAGATGCTGTCCCAACGGCGTGTCGAACCATCCGGCGTTCAGCTTGGATAACATAGCCCTTCCT CCTGTCTCTTGCAGTCCATC
Downstream 100 bases:
>100_bases CTGCCCGGCGGACGCCCCTTAGGATGGAGCCTGCTTGAGTACGGGAGACCCACGTGCCCGGAATCAAATTCACCCGTATC GGTGCAGCGCGCCTCCCTCT
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLTLIPLPAFEDNYIWVWHDAKYAVAVDPGDPAVLSTYLDSRGLALAAVLVTHHHRDHTGGNTWLRQRYNCAIYAPDNPR IPAVSHVVRGGDSVAVPELGLALAVLATPGHTLDHVSYVGNGHLFCGDTLFGCGCGKLFEGDAAMMSASLDALAALPPTT RVCCAHEYTLSNIDFAKTIDGANPALLERERIDRAARAQNRPTLPSTLALERTTNPFLRFHDADMRAFAVGELGSPDPGP ATVFGAIRAAKDRWDG
Sequences:
>Translated_256_residues MLTLIPLPAFEDNYIWVWHDAKYAVAVDPGDPAVLSTYLDSRGLALAAVLVTHHHRDHTGGNTWLRQRYNCAIYAPDNPR IPAVSHVVRGGDSVAVPELGLALAVLATPGHTLDHVSYVGNGHLFCGDTLFGCGCGKLFEGDAAMMSASLDALAALPPTT RVCCAHEYTLSNIDFAKTIDGANPALLERERIDRAARAQNRPTLPSTLALERTTNPFLRFHDADMRAFAVGELGSPDPGP ATVFGAIRAAKDRWDG >Mature_256_residues MLTLIPLPAFEDNYIWVWHDAKYAVAVDPGDPAVLSTYLDSRGLALAAVLVTHHHRDHTGGNTWLRQRYNCAIYAPDNPR IPAVSHVVRGGDSVAVPELGLALAVLATPGHTLDHVSYVGNGHLFCGDTLFGCGCGKLFEGDAAMMSASLDALAALPPTT RVCCAHEYTLSNIDFAKTIDGANPALLERERIDRAARAQNRPTLPSTLALERTTNPFLRFHDADMRAFAVGELGSPDPGP ATVFGAIRAAKDRWDG
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family
Homologues:
Organism=Homo sapiens, GI116642887, Length=269, Percent_Identity=36.8029739776952, Blast_Score=158, Evalue=6e-39, Organism=Homo sapiens, GI21703352, Length=269, Percent_Identity=36.8029739776952, Blast_Score=157, Evalue=8e-39, Organism=Homo sapiens, GI94538320, Length=259, Percent_Identity=38.2239382239382, Blast_Score=154, Evalue=8e-38, Organism=Homo sapiens, GI94538322, Length=259, Percent_Identity=38.2239382239382, Blast_Score=153, Evalue=1e-37, Organism=Homo sapiens, GI14150041, Length=259, Percent_Identity=35.5212355212355, Blast_Score=135, Evalue=3e-32, Organism=Homo sapiens, GI46361987, Length=187, Percent_Identity=38.5026737967914, Blast_Score=110, Evalue=1e-24, Organism=Escherichia coli, GI1786406, Length=255, Percent_Identity=41.5686274509804, Blast_Score=176, Evalue=1e-45, Organism=Escherichia coli, GI1787158, Length=158, Percent_Identity=29.746835443038, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17536925, Length=233, Percent_Identity=33.4763948497854, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6320478, Length=272, Percent_Identity=28.3088235294118, Blast_Score=89, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6324614, Length=265, Percent_Identity=29.0566037735849, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI21356335, Length=258, Percent_Identity=37.5968992248062, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24667711, Length=260, Percent_Identity=37.3076923076923, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24667703, Length=258, Percent_Identity=37.5968992248062, Blast_Score=165, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLO2_THIDA (Q3SIB0)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315423.1 - ProteinModelPortal: Q3SIB0 - SMR: Q3SIB0 - STRING: Q3SIB0 - GeneID: 3673050 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1665 - NMPDR: fig|292415.3.peg.1762 - eggNOG: COG0491 - HOGENOM: HBG753931 - OMA: WCAHEYT - PhylomeDB: Q3SIB0 - BioCyc: TDEN292415:TBD_1665-MONOMER - HAMAP: MF_01374 - InterPro: IPR001279 - InterPro: IPR017782 - SMART: SM00849 - TIGRFAMs: TIGR03413
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.2.6
Molecular weight: Translated: 27521; Mature: 27521
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLIPLPAFEDNYIWVWHDAKYAVAVDPGDPAVLSTYLDSRGLALAAVLVTHHHRDHTG CEEEEECCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCC GNTWLRQRYNCAIYAPDNPRIPAVSHVVRGGDSVAVPELGLALAVLATPGHTLDHVSYVG CCHHHHCCCCEEEECCCCCCCCHHHHHHCCCCCEECCCCCEEEEEEECCCCCHHHEEEEC NGHLFCGDTLFGCGCGKLFEGDAAMMSASLDALAALPPTTRVCCAHEYTLSNIDFAKTID CCEEEECCCEECCCCCCEECCCHHHHHHHHHHHHCCCCCCEEEEEECEECCCCCHHHHCC GANPALLERERIDRAARAQNRPTLPSTLALERTTNPFLRFHDADMRAFAVGELGSPDPGP CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCH ATVFGAIRAAKDRWDG HHHHHHHHHHHHCCCC >Mature Secondary Structure MLTLIPLPAFEDNYIWVWHDAKYAVAVDPGDPAVLSTYLDSRGLALAAVLVTHHHRDHTG CEEEEECCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCC GNTWLRQRYNCAIYAPDNPRIPAVSHVVRGGDSVAVPELGLALAVLATPGHTLDHVSYVG CCHHHHCCCCEEEECCCCCCCCHHHHHHCCCCCEECCCCCEEEEEEECCCCCHHHEEEEC NGHLFCGDTLFGCGCGKLFEGDAAMMSASLDALAALPPTTRVCCAHEYTLSNIDFAKTID CCEEEECCCEECCCCCCEECCCHHHHHHHHHHHHCCCCCCEEEEEECEECCCCCHHHHCC GANPALLERERIDRAARAQNRPTLPSTLALERTTNPFLRFHDADMRAFAVGELGSPDPGP CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCH ATVFGAIRAAKDRWDG HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA