| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317669
Identifier: 74317669
GI number: 74317669
Start: 1735029
End: 1735580
Strand: Reverse
Name: 74317669
Synonym: Tbd_1651
Alternate gene names: NA
Gene position: 1735580-1735029 (Counterclockwise)
Preceding gene: 74317670
Following gene: 74317666
Centisome position: 59.65
GC content: 67.03
Gene sequence:
>552_bases ATGAAGGTCTGCATCCTCTCCGACTCCCACGACAACCGCCGCCTGCTCGGTGCTGCGGTCGAGCACGCCAAGGCCCATGG CGCGGAAGCGGTGCTGCACTGCGGCGACGTGGTCGCGCCGACCACGTTGCGCGTGCTACAGAAATACGAACTGCCGGTGC ACGTCATCCACGGCAACAACACCGGCGACCTCTACAACATGAGCCGGCTCGCCGCCGAGCCCAACAGCGTCATCCGCTAC CATGGCCAGGACGCGGCGTTCACGCTGGCCGACCGCGATCTCTTCCTGGTCCACTATCCGCACTACGCCCACGCGCTCGC CTGCACGGGCGACTACGACCTCGTCTGCTGCGGTCACGATCACAAGTCAAGCGTCTCGCAGGTGGCGAACGTCAAGGGCG GATCGACCTGGCTCGTCAACCCGGGCACGGTCGGTGGGGTCGGCGCGCCGCCGACCTACATCATGGCCGACCTTCTGGCG ATGCAGTTCGAGATCGTGACGGTCGAGGCGGCGCCCGCGTCGGTGCTCCCGCCGGTGACGCCGCATGTATAG
Upstream 100 bases:
>100_bases GCCGCATTTCCATGAATTCATAAGGCGCGGCGAAAGCCGCCCAAAATCCGTAGCCCCCAAATCCTAGCCCCTAGCCCCTG ACCCCTGACCCCTGACCCCC
Downstream 100 bases:
>100_bases CCGGCGCTGCATGTCGGACAGGCATCCGGCCGCCTAGCAAAAGAAAACGGGGCGCGATGCCCCGTTTTTGCGTTGCCGCG GTCGTCGTCTTCCGCTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Metallophosphoesterase; Phosphodiesterase Family Protein; Phosphoesterase
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKVCILSDSHDNRRLLGAAVEHAKAHGAEAVLHCGDVVAPTTLRVLQKYELPVHVIHGNNTGDLYNMSRLAAEPNSVIRY HGQDAAFTLADRDLFLVHYPHYAHALACTGDYDLVCCGHDHKSSVSQVANVKGGSTWLVNPGTVGGVGAPPTYIMADLLA MQFEIVTVEAAPASVLPPVTPHV
Sequences:
>Translated_183_residues MKVCILSDSHDNRRLLGAAVEHAKAHGAEAVLHCGDVVAPTTLRVLQKYELPVHVIHGNNTGDLYNMSRLAAEPNSVIRY HGQDAAFTLADRDLFLVHYPHYAHALACTGDYDLVCCGHDHKSSVSQVANVKGGSTWLVNPGTVGGVGAPPTYIMADLLA MQFEIVTVEAAPASVLPPVTPHV >Mature_183_residues MKVCILSDSHDNRRLLGAAVEHAKAHGAEAVLHCGDVVAPTTLRVLQKYELPVHVIHGNNTGDLYNMSRLAAEPNSVIRY HGQDAAFTLADRDLFLVHYPHYAHALACTGDYDLVCCGHDHKSSVSQVANVKGGSTWLVNPGTVGGVGAPPTYIMADLLA MQFEIVTVEAAPASVLPPVTPHV
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19550; Mature: 19550
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVCILSDSHDNRRLLGAAVEHAKAHGAEAVLHCGDVVAPTTLRVLQKYELPVHVIHGNN CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCC TGDLYNMSRLAAEPNSVIRYHGQDAAFTLADRDLFLVHYPHYAHALACTGDYDLVCCGHD CCCEEEHHHHHCCCCCEEEECCCCCEEEEECCCEEEEECCCCCEEEEECCCCEEEEECCC HKSSVSQVANVKGGSTWLVNPGTVGGVGAPPTYIMADLLAMQFEIVTVEAAPASVLPPVT CHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCC PHV CCC >Mature Secondary Structure MKVCILSDSHDNRRLLGAAVEHAKAHGAEAVLHCGDVVAPTTLRVLQKYELPVHVIHGNN CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCC TGDLYNMSRLAAEPNSVIRYHGQDAAFTLADRDLFLVHYPHYAHALACTGDYDLVCCGHD CCCEEEHHHHHCCCCCEEEECCCCCEEEEECCCEEEEECCCCCEEEEECCCCEEEEECCC HKSSVSQVANVKGGSTWLVNPGTVGGVGAPPTYIMADLLAMQFEIVTVEAAPASVLPPVT CHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCC PHV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA