| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is cheB
Identifier: 74317633
GI number: 74317633
Start: 1697024
End: 1698094
Strand: Reverse
Name: cheB
Synonym: Tbd_1615
Alternate gene names: 74317633
Gene position: 1698094-1697024 (Counterclockwise)
Preceding gene: 74317634
Following gene: 74317632
Centisome position: 58.36
GC content: 63.4
Gene sequence:
>1071_bases ATGAAAATCAAGGTACTGATCGTCGACGACTCCGCGCTGATCCGCGGGGTGATGCGCGAAATTATCAACAGTCAGCCGGA CATGGAGGTCGTCGGCGTCGCGCCCGACCCGATCGCCGCGCGCGAACTCATCAAGCAAACCAATCCCGATGTGCTTACGC TCGACGTCGAGATGCCCAAGATGGATGGCCTCGAGTTCCTCGAAAAGCTCATGCGCCTGCGCCCGATGCCGGTCGTCATG GTGTCGTCGCTGACCGAACGGGGTTCGGAAATCACGATGCGGGCGCTCGAACTTGGTGCGGTCGACTTCGTCACCAAGCC CAAGATGTCGATCCAGAGCGGCATGCTCGAGTACACCGATCTCATTGCCGACAAGATCCGTATCGCCGCGCGCGCGCGCA TCAAGCCGCGGACACCGCACGCGCAGGGCGGGCAAAGCGGAACGACGCTGGCCGCCGTGCGCAATCCGCTCACCAGCAGC GAGAAGCTCATCATCATCGGCGCCTCGACCGGCGGCACCGAAGCGATCAAGGACTTCCTCATGCAGCTTCCGCCCGACAG CCCGGGTGTTCTGATCACGCAGCACATGCCGGAAGGCTTTACCCGCTCCTTCGCCAACCGGCTCGACAAGTTGTGCAAGA TCTCGGTCAAGGAAGCGGAGGGCGGCGAGCGTGTGCTGCCCGGGCATGCCTACCTCGCGCCCGGACACTCGCATCTGCTG CTCGTCAGAAGCGGCGCCAACTACATGACCAAGCTCGACCAGGGTCCGCCGGTCAATCGCCACCGTCCCTCGGTCGACGT ACTCTTCAACTCGGCCGCACTTACGGCCGGCAAGAACGCGGTCGGCGTGATCCTGACCGGCATGGGCAAGGATGGTGCCG CCGGCATGCTCGAGATGAAAAAGGCGGGCGGTTACAACCTGGCGCAGGACGAGGCCTCGTGCGTGGTGTTCGGCATGCCC AAGGAAGCCATTGCGGTTGGCGCGACGCACGAGGTTGCCCCTCTACATGAATTGCCGCGCCGCGTGCTCGAATTTTTCGC AGCCCACGGCGAACGCGCGATGCGCGTATAA
Upstream 100 bases:
>100_bases GGTGAAACGCGAACAGGATTACGCGAGCCGCCTCAAGAGCAACGTCGTCGCGGGCGAGGTCGATCTGTTCTGACCGACCG CGGCTGTGCAGGAACGAAAA
Downstream 100 bases:
>100_bases ACCGCGTCGCGGCGCGCTTTGCGGCACGGAGCGGCTTAAGTTTGCTATGCTCGTGCCGATTATTTATAAACACGATAAGC CTCACTGACGGAGTACTGCA
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKIKVLIVDDSALIRGVMREIINSQPDMEVVGVAPDPIAARELIKQTNPDVLTLDVEMPKMDGLEFLEKLMRLRPMPVVM VSSLTERGSEITMRALELGAVDFVTKPKMSIQSGMLEYTDLIADKIRIAARARIKPRTPHAQGGQSGTTLAAVRNPLTSS EKLIIIGASTGGTEAIKDFLMQLPPDSPGVLITQHMPEGFTRSFANRLDKLCKISVKEAEGGERVLPGHAYLAPGHSHLL LVRSGANYMTKLDQGPPVNRHRPSVDVLFNSAALTAGKNAVGVILTGMGKDGAAGMLEMKKAGGYNLAQDEASCVVFGMP KEAIAVGATHEVAPLHELPRRVLEFFAAHGERAMRV
Sequences:
>Translated_356_residues MKIKVLIVDDSALIRGVMREIINSQPDMEVVGVAPDPIAARELIKQTNPDVLTLDVEMPKMDGLEFLEKLMRLRPMPVVM VSSLTERGSEITMRALELGAVDFVTKPKMSIQSGMLEYTDLIADKIRIAARARIKPRTPHAQGGQSGTTLAAVRNPLTSS EKLIIIGASTGGTEAIKDFLMQLPPDSPGVLITQHMPEGFTRSFANRLDKLCKISVKEAEGGERVLPGHAYLAPGHSHLL LVRSGANYMTKLDQGPPVNRHRPSVDVLFNSAALTAGKNAVGVILTGMGKDGAAGMLEMKKAGGYNLAQDEASCVVFGMP KEAIAVGATHEVAPLHELPRRVLEFFAAHGERAMRV >Mature_356_residues MKIKVLIVDDSALIRGVMREIINSQPDMEVVGVAPDPIAARELIKQTNPDVLTLDVEMPKMDGLEFLEKLMRLRPMPVVM VSSLTERGSEITMRALELGAVDFVTKPKMSIQSGMLEYTDLIADKIRIAARARIKPRTPHAQGGQSGTTLAAVRNPLTSS EKLIIIGASTGGTEAIKDFLMQLPPDSPGVLITQHMPEGFTRSFANRLDKLCKISVKEAEGGERVLPGHAYLAPGHSHLL LVRSGANYMTKLDQGPPVNRHRPSVDVLFNSAALTAGKNAVGVILTGMGKDGAAGMLEMKKAGGYNLAQDEASCVVFGMP KEAIAVGATHEVAPLHELPRRVLEFFAAHGERAMRV
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
Organism=Escherichia coli, GI1788192, Length=347, Percent_Identity=66.8587896253602, Blast_Score=463, Evalue=1e-132, Organism=Escherichia coli, GI87082052, Length=118, Percent_Identity=35.5932203389831, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHEB_THIDA (Q3SIG0)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315373.1 - ProteinModelPortal: Q3SIG0 - SMR: Q3SIG0 - STRING: Q3SIG0 - GeneID: 3673000 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1615 - NMPDR: fig|292415.3.peg.1615 - eggNOG: COG2201 - HOGENOM: HBG705324 - OMA: FVTKPKL - PhylomeDB: Q3SIG0 - ProtClustDB: PRK00742 - BioCyc: TDEN292415:TBD_1615-MONOMER - GO: GO:0005737 - GO: GO:0006935 - HAMAP: MF_00099 - InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 - Gene3D: G3DSA:3.40.50.180 - PIRSF: PIRSF000876 - SMART: SM00448
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg; SSF52738 Chemotax_RR_pGlu_Me-esterase; SSF52172 CheY_like
EC number: =3.1.1.61
Molecular weight: Translated: 38395; Mature: 38395
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS50122 CHEB; PS50110 RESPONSE_REGULATORY
Important sites: ACT_SITE 169-169 ACT_SITE 195-195 ACT_SITE 291-291
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKVLIVDDSALIRGVMREIINSQPDMEVVGVAPDPIAARELIKQTNPDVLTLDVEMPK CEEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCC MDGLEFLEKLMRLRPMPVVMVSSLTERGSEITMRALELGAVDFVTKPKMSIQSGMLEYTD CCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHH LIADKIRIAARARIKPRTPHAQGGQSGTTLAAVRNPLTSSEKLIIIGASTGGTEAIKDFL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH MQLPPDSPGVLITQHMPEGFTRSFANRLDKLCKISVKEAEGGERVLPGHAYLAPGHSHLL HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCEECCCCEEECCCCCEEE LVRSGANYMTKLDQGPPVNRHRPSVDVLFNSAALTAGKNAVGVILTGMGKDGAAGMLEMK EEECCCHHHHHCCCCCCCCCCCCCCEEEEECHHHCCCCCEEEEEEEECCCCCCCCHHHHH KAGGYNLAQDEASCVVFGMPKEAIAVGATHEVAPLHELPRRVLEFFAAHGERAMRV HCCCCCCCCCCCCEEEEECCHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MKIKVLIVDDSALIRGVMREIINSQPDMEVVGVAPDPIAARELIKQTNPDVLTLDVEMPK CEEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCC MDGLEFLEKLMRLRPMPVVMVSSLTERGSEITMRALELGAVDFVTKPKMSIQSGMLEYTD CCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHH LIADKIRIAARARIKPRTPHAQGGQSGTTLAAVRNPLTSSEKLIIIGASTGGTEAIKDFL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH MQLPPDSPGVLITQHMPEGFTRSFANRLDKLCKISVKEAEGGERVLPGHAYLAPGHSHLL HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCEECCCCEEECCCCCEEE LVRSGANYMTKLDQGPPVNRHRPSVDVLFNSAALTAGKNAVGVILTGMGKDGAAGMLEMK EEECCCHHHHHCCCCCCCCCCCCCCEEEEECHHHCCCCCEEEEEEEECCCCCCCCHHHHH KAGGYNLAQDEASCVVFGMPKEAIAVGATHEVAPLHELPRRVLEFFAAHGERAMRV HCCCCCCCCCCCCEEEEECCHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA