| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is mopB [H]
Identifier: 74317627
GI number: 74317627
Start: 1693345
End: 1693779
Strand: Direct
Name: mopB [H]
Synonym: Tbd_1609
Alternate gene names: 74317627
Gene position: 1693345-1693779 (Clockwise)
Preceding gene: 74317626
Following gene: 74317628
Centisome position: 58.19
GC content: 71.03
Gene sequence:
>435_bases GTGACCCATTTCCGCTACGTCGCGTCGCTGCCGCTCTGCGCGCCCGCGCTCGCGCGCGCAGCCGACGCCCCGGTATCGGC CGCCGGCAGCCTTTTGCAGGTCTTCGTCGGCCTCGTCGCCGTCCTGCTGCTGATCGCGGCGACCGCCTGGGTCGCCAAGC GCTTCGGCGTCGCGCGGCCCGGCGCGTCGAGCCTGCTGCAGATCGTGAGCAGCGCCTCGGTCGGTGCACGCGAGCGCGTC GTCGTCGTCGAGGTCGGAGAAACCTGGCTTGTCGTCGGCGTCGCGCCGGGCAGCGTCAACGCGCTCGCCACACTACCGAA GGGCACCGTGCCGCCGCAGGCCGGCTCGGGGATCGGACTCGGCTCCCCCTTCGCCGCCCGCCTGCAACAGCTCATCGAAA AATCTCCCTACGGGGACAAGCGTCGTGAAAAGTAA
Upstream 100 bases:
>100_bases GCCTGATCGCCCAGGGCGAGGTGGTCGTCGTCAACGACAAATTCGGCGTGCGGCTGACCGACATCATCACGCCGGCCGAA CGCATCCGGAAGCTCAACAA
Downstream 100 bases:
>100_bases ATTATTTCACCGCGTCGCGCAGGCGCTCGTCATGCTGGCCGCGCTCGCCCTTCCGACGTTCGCGCTCGCCCAGAGCGCCG GCCTGCCGGCGTTCACGAGC
Product: flagellar biogenesis protein FliO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTHFRYVASLPLCAPALARAADAPVSAAGSLLQVFVGLVAVLLLIAATAWVAKRFGVARPGASSLLQIVSSASVGARERV VVVEVGETWLVVGVAPGSVNALATLPKGTVPPQAGSGIGLGSPFAARLQQLIEKSPYGDKRREK
Sequences:
>Translated_144_residues MTHFRYVASLPLCAPALARAADAPVSAAGSLLQVFVGLVAVLLLIAATAWVAKRFGVARPGASSLLQIVSSASVGARERV VVVEVGETWLVVGVAPGSVNALATLPKGTVPPQAGSGIGLGSPFAARLQQLIEKSPYGDKRREK >Mature_143_residues THFRYVASLPLCAPALARAADAPVSAAGSLLQVFVGLVAVLLLIAATAWVAKRFGVARPGASSLLQIVSSASVGARERVV VVEVGETWLVVGVAPGSVNALATLPKGTVPPQAGSGIGLGSPFAARLQQLIEKSPYGDKRREK
Specific function: Required for both, motility and virulence [H]
COG id: COG3190
COG function: function code N; Flagellar biogenesis protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein. Bacterial flagellum basal body [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliO/mopB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022781 [H]
Pfam domain/function: PF04347 FliO [H]
EC number: NA
Molecular weight: Translated: 14739; Mature: 14608
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHFRYVASLPLCAPALARAADAPVSAAGSLLQVFVGLVAVLLLIAATAWVAKRFGVARP CCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GASSLLQIVSSASVGARERVVVVEVGETWLVVGVAPGSVNALATLPKGTVPPQAGSGIGL CHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCC GSPFAARLQQLIEKSPYGDKRREK CCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure THFRYVASLPLCAPALARAADAPVSAAGSLLQVFVGLVAVLLLIAATAWVAKRFGVARP CCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GASSLLQIVSSASVGARERVVVVEVGETWLVVGVAPGSVNALATLPKGTVPPQAGSGIGL CHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCC GSPFAARLQQLIEKSPYGDKRREK CCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8412685 [H]