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The map label for this gene is fliN [H]

Identifier: 74317626

GI number: 74317626

Start: 1692950

End: 1693348

Strand: Direct

Name: fliN [H]

Synonym: Tbd_1608

Alternate gene names: 74317626

Gene position: 1692950-1693348 (Clockwise)

Preceding gene: 74317625

Following gene: 74317627

Centisome position: 58.18

GC content: 65.41

Gene sequence:

>399_bases
ATGTCTGAAGACACCACGCAAACGATCGCCGAGGACGATTGGGCCGCGGCCATGGCCGAGCAGGCCGCGCCGGCCGCCGC
CCCCGCCCCCGAGATCTTCAAGGAATTCTCGGGAAGCGCGTCGAGCACGGGCCTCGCCAACGACATCGATTTCATCCTCG
ACATCCCGGTCCTGCTGACCGTCGAACTCGGCCGCACCAAGATCGCGATCAAGAATCTGCTGCAGCTCGCGCAGGGCTCG
GTGGTCGAGCTCGACGGCCTGGCTGGCGAGCCGATGGACGTGCTGGTCAACGGCTGCCTGATCGCCCAGGGCGAGGTGGT
CGTCGTCAACGACAAATTCGGCGTGCGGCTGACCGACATCATCACGCCGGCCGAACGCATCCGGAAGCTCAACAAGTGA

Upstream 100 bases:

>100_bases
GTCATGGAATGCGCATACGGAAAATTCAACGGCCAGTACACCCTGCGCGTCGAAAAGCTGTTGTCGACCAGCGCGGTCGA
ACCGAAAACAGGAGAGCAGC

Downstream 100 bases:

>100_bases
CCCATTTCCGCTACGTCGCGTCGCTGCCGCTCTGCGCGCCCGCGCTCGCGCGCGCAGCCGACGCCCCGGTATCGGCCGCC
GGCAGCCTTTTGCAGGTCTT

Product: flagellar motor switch/type III secretory pathway protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSEDTTQTIAEDDWAAAMAEQAAPAAAPAPEIFKEFSGSASSTGLANDIDFILDIPVLLTVELGRTKIAIKNLLQLAQGS
VVELDGLAGEPMDVLVNGCLIAQGEVVVVNDKFGVRLTDIITPAERIRKLNK

Sequences:

>Translated_132_residues
MSEDTTQTIAEDDWAAAMAEQAAPAAAPAPEIFKEFSGSASSTGLANDIDFILDIPVLLTVELGRTKIAIKNLLQLAQGS
VVELDGLAGEPMDVLVNGCLIAQGEVVVVNDKFGVRLTDIITPAERIRKLNK
>Mature_131_residues
SEDTTQTIAEDDWAAAMAEQAAPAAAPAPEIFKEFSGSASSTGLANDIDFILDIPVLLTVELGRTKIAIKNLLQLAQGSV
VELDGLAGEPMDVLVNGCLIAQGEVVVVNDKFGVRLTDIITPAERIRKLNK

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=123, Percent_Identity=61.7886178861789, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 13963; Mature: 13832

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDTTQTIAEDDWAAAMAEQAAPAAAPAPEIFKEFSGSASSTGLANDIDFILDIPVLLT
CCCCCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHEECCEEEE
VELGRTKIAIKNLLQLAQGSVVELDGLAGEPMDVLVNGCLIAQGEVVVVNDKFGVRLTDI
EECCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCEEECCCCEEEEECCCCEEHHHH
ITPAERIRKLNK
CCCHHHHHHCCC
>Mature Secondary Structure 
SEDTTQTIAEDDWAAAMAEQAAPAAAPAPEIFKEFSGSASSTGLANDIDFILDIPVLLT
CCCCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHEECCEEEE
VELGRTKIAIKNLLQLAQGSVVELDGLAGEPMDVLVNGCLIAQGEVVVVNDKFGVRLTDI
EECCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCEEECCCCEEEEECCCCEEHHHH
ITPAERIRKLNK
CCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2651416; 9097040; 9278503 [H]