Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317539

Identifier: 74317539

GI number: 74317539

Start: 1609333

End: 1609947

Strand: Reverse

Name: 74317539

Synonym: Tbd_1521

Alternate gene names: NA

Gene position: 1609947-1609333 (Counterclockwise)

Preceding gene: 74317542

Following gene: 74317537

Centisome position: 55.33

GC content: 71.22

Gene sequence:

>615_bases
ATGAGCGGGTGCGGCTGCGATTCGGTGTGCGAGGCGCCCGCGCCCGATCCGGGTTACCGGCGGGCGTTGTGGCTTGCGCT
CGTGCTGAACGTCCTGATGTTCGTGGTCGAGCTGGGCGCGAGCTTCTCTGCGCAGTCGGTCTCGCTGCTAGCCGACGCGG
TCGATTTCCTCGGCGACGCCGGTAACTACGGCGTCGCGCTCTTCGTGCTCGGACTCGCACCCGTCTGGCGCTCGCGCACC
GCGCTATGGAAGGGTTGGCTGATGATCGGCTACGGCGTCTTCGTGCTCGGCAAGTCGGCCTGGCAGTGGTCAGCGGGCGT
CGTGCCCGAGCCGGTCATCATGGGCTGGGTGAGCCTGTTGGCGCTGGCCGTGAACGTCGGCGTCGCCGCGCTGCTGTACG
CGCACCGCCGCGGCGACGCGCAGGCCCGCTCGGTGTGGCTGTGCTCACGCAACGACGCGCTCGGCAATCTCGCGGTCATC
GGCGCGGCCGGCGGCGTATGGGTGACGGCCCACGGCTGGCCCGACATCGGGGTTGCCGTGGTGCTGGCCGGGCTGGCCCT
GAGCTCAGGCGCCTCGGTGGTGCGACACGCCCGCGCCGAATTGCGCGGCGCCTAG

Upstream 100 bases:

>100_bases
GGGGAGTGTGCATTCGTGGACATGAGTGGCAGGATGGCGCGATGAGAAAGACGGCATTCTACTCGCCGCGGCCTGCCCGG
CGGCGCGGGGTACGGCGCAC

Downstream 100 bases:

>100_bases
CGTTCCTGCTGGCGCGCGAGGGCCCAGGCGACATGCTCGCGTACCATCGCCGACGGGTGATCGAGGCGTGTGCCGAGCGC
GGCTTCGATTGCGGGGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Co/Zn/Cd Efflux System Component; Cation Efflux Family Protein; Cation Efflux System Protein; Cation Efflux Permease; Cation Diffusion Facilitator Family Transporter; Heavy Metal Detoxification Protein; Cation Diffusion Facilitator; Cation Efflux Protein ; CDF Family Heavy Metal/H(+) Antiporter; Co/Zn/Cd Efflux Protein; RND Efflux System Protein; Co/Zn/Cd Efflux System Protein; Cation Efflux System Permease; CDF Family Cobalt/Cadmium/Zinc Transporter

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSGCGCDSVCEAPAPDPGYRRALWLALVLNVLMFVVELGASFSAQSVSLLADAVDFLGDAGNYGVALFVLGLAPVWRSRT
ALWKGWLMIGYGVFVLGKSAWQWSAGVVPEPVIMGWVSLLALAVNVGVAALLYAHRRGDAQARSVWLCSRNDALGNLAVI
GAAGGVWVTAHGWPDIGVAVVLAGLALSSGASVVRHARAELRGA

Sequences:

>Translated_204_residues
MSGCGCDSVCEAPAPDPGYRRALWLALVLNVLMFVVELGASFSAQSVSLLADAVDFLGDAGNYGVALFVLGLAPVWRSRT
ALWKGWLMIGYGVFVLGKSAWQWSAGVVPEPVIMGWVSLLALAVNVGVAALLYAHRRGDAQARSVWLCSRNDALGNLAVI
GAAGGVWVTAHGWPDIGVAVVLAGLALSSGASVVRHARAELRGA
>Mature_203_residues
SGCGCDSVCEAPAPDPGYRRALWLALVLNVLMFVVELGASFSAQSVSLLADAVDFLGDAGNYGVALFVLGLAPVWRSRTA
LWKGWLMIGYGVFVLGKSAWQWSAGVVPEPVIMGWVSLLALAVNVGVAALLYAHRRGDAQARSVWLCSRNDALGNLAVIG
AAGGVWVTAHGWPDIGVAVVLAGLALSSGASVVRHARAELRGA

Specific function: Unknown

COG id: COG1230

COG function: function code P; Co/Zn/Cd efflux system component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21228; Mature: 21097

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGCGCDSVCEAPAPDPGYRRALWLALVLNVLMFVVELGASFSAQSVSLLADAVDFLGDA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
GNYGVALFVLGLAPVWRSRTALWKGWLMIGYGVFVLGKSAWQWSAGVVPEPVIMGWVSLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ALAVNVGVAALLYAHRRGDAQARSVWLCSRNDALGNLAVIGAAGGVWVTAHGWPDIGVAV
HHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCEEEEECCCCEEEEECCCCCHHHHH
VLAGLALSSGASVVRHARAELRGA
HHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGCGCDSVCEAPAPDPGYRRALWLALVLNVLMFVVELGASFSAQSVSLLADAVDFLGDA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
GNYGVALFVLGLAPVWRSRTALWKGWLMIGYGVFVLGKSAWQWSAGVVPEPVIMGWVSLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ALAVNVGVAALLYAHRRGDAQARSVWLCSRNDALGNLAVIGAAGGVWVTAHGWPDIGVAV
HHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCEEEEECCCCEEEEECCCCCHHHHH
VLAGLALSSGASVVRHARAELRGA
HHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA