| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is uhpC [C]
Identifier: 74317542
GI number: 74317542
Start: 1611291
End: 1612595
Strand: Reverse
Name: uhpC [C]
Synonym: Tbd_1524
Alternate gene names: 74317542
Gene position: 1612595-1611291 (Counterclockwise)
Preceding gene: 74317543
Following gene: 74317539
Centisome position: 55.42
GC content: 70.65
Gene sequence:
>1305_bases ATGGGCGCTGAATTGCGTCGTCCGCCGCCGGCCGCACTCGCCTGGCTGACCTGGGGCCTGCTCGCGAGCCTCTATTTCGT CGGCTATTTCCAGCGCGTCGCGCCGGCCGTGATGGTCGACGAACTGATGCGCGATTTCAGCATCGCCGCCACCCTGCTCG GCAACCTCTCCGCAATCTACTTCTATACCTACGCCGCGATGCAGATCCCGAGCGGCCTGCTCGCCGATGCCGTGGGGCCG CGGCGGACCGGCGCCGCGGCGGCGCTCGCCGCAGCGCTCGGCATCGTCGTGTTCGCGCGTGCCGACAGCCTCTGGCTCGC GGCGCTCGGCCGCGGGCTCGTCGGCGCATCGGTGGCCGTGGCCTTCGTCGCGTGCATGAAACTCGCCGGCCACTGGTTCC CGGCCAATCGCTTCGCGACGGTGACGGGGGTCGCGCTGCTGATCGGCAACCTCGGCGGCGTGCTCGCCGGCGTGCCGCTA TCGGAAGCCGTCGCAGGCATCGGCTGGCGCAACGCCATGCTCGTCAGCGCGGGCGGCACCCTGTTGCTCGCCGCCGCGGT CTGGCTCTGGGTGCGAGACGATCCGGGCGAGCGGAGCTTTGCGACTTATGCCCATCCCGAGGCCTTGAGCGGCGGTGGAA TGGCGCCGCTGCGCAGCCTGCGGCTCGTGCTCTCGGAGCGCGACACCTGGCTGCTCTTCTTCGCCGGCGGGATGATCGCC GCGCCTGTGTTGACCTTCGCGGGTCTCTGGGGCGTGCCCTATCTGGTGCAGATCCACGGCATGACGCGCAGCGAGGCCGC GGGCTTCACGACGACGATGCTGCTCGGCTTCGCGTTCGGCGGACTGCTGCTTGGCAGCCTGTCCGACCGCCTGCAGCGCC GCAAGCTGCCCTATCTCGGCGCGGCGATCGTTCACGCCGGCGGCTGGCTCGGCTTTCTGTTTCTTCCGCAGGGGCCGGCG GCTGGCCTCTACCTGTTCTTCGCCGTCATCGGCTTCTCGGCCGGCGGCCTCATCATCGGCTTCGCCTTCGCGCGCGAGGT CAACCACCCCGGTGCCGCCGGCACCGTCGGTGGCGTCGTCAACATGTCGGTTCTGGGTTTTGCCGCGATCCAGCAGAGCG GCGTCGGCTGGATTCTCGACCGGCACTGGGCGGGCGGCGGGCTCGCCGGTGCGCGCGTCTACGACGCCGCGGCCTATCAC GCCGCTTTTCTGTGGCTCGCCGTCAGCGCGCTCGGTGCGGTCGTCTGCGTCGCGCTGACGCGCGAGACCCATTGTCGGCT GCGCTTCGACGCGTCGCGCAGGTGA
Upstream 100 bases:
>100_bases CGGTAGCGAGAAGGCACAGGAACTCGCGCGCGACACGATGCGCGACGTGCGCGAGTCGATGGGACTGACCTTCGGCTGAG CGGCGGCACGCGCATCGCGC
Downstream 100 bases:
>100_bases CGCCGACCTGAGTCGGCGCCCGCACGTTCAGCTCTCGCTGCCGGGTTTCAGCGTGCGGAGCTTCTTGGTTTCGCCTCGCC GCTGCTTGCCTTCGAGACGG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MGAELRRPPPAALAWLTWGLLASLYFVGYFQRVAPAVMVDELMRDFSIAATLLGNLSAIYFYTYAAMQIPSGLLADAVGP RRTGAAAALAAALGIVVFARADSLWLAALGRGLVGASVAVAFVACMKLAGHWFPANRFATVTGVALLIGNLGGVLAGVPL SEAVAGIGWRNAMLVSAGGTLLLAAAVWLWVRDDPGERSFATYAHPEALSGGGMAPLRSLRLVLSERDTWLLFFAGGMIA APVLTFAGLWGVPYLVQIHGMTRSEAAGFTTTMLLGFAFGGLLLGSLSDRLQRRKLPYLGAAIVHAGGWLGFLFLPQGPA AGLYLFFAVIGFSAGGLIIGFAFAREVNHPGAAGTVGGVVNMSVLGFAAIQQSGVGWILDRHWAGGGLAGARVYDAAAYH AAFLWLAVSALGAVVCVALTRETHCRLRFDASRR
Sequences:
>Translated_434_residues MGAELRRPPPAALAWLTWGLLASLYFVGYFQRVAPAVMVDELMRDFSIAATLLGNLSAIYFYTYAAMQIPSGLLADAVGP RRTGAAAALAAALGIVVFARADSLWLAALGRGLVGASVAVAFVACMKLAGHWFPANRFATVTGVALLIGNLGGVLAGVPL SEAVAGIGWRNAMLVSAGGTLLLAAAVWLWVRDDPGERSFATYAHPEALSGGGMAPLRSLRLVLSERDTWLLFFAGGMIA APVLTFAGLWGVPYLVQIHGMTRSEAAGFTTTMLLGFAFGGLLLGSLSDRLQRRKLPYLGAAIVHAGGWLGFLFLPQGPA AGLYLFFAVIGFSAGGLIIGFAFAREVNHPGAAGTVGGVVNMSVLGFAAIQQSGVGWILDRHWAGGGLAGARVYDAAAYH AAFLWLAVSALGAVVCVALTRETHCRLRFDASRR >Mature_433_residues GAELRRPPPAALAWLTWGLLASLYFVGYFQRVAPAVMVDELMRDFSIAATLLGNLSAIYFYTYAAMQIPSGLLADAVGPR RTGAAAALAAALGIVVFARADSLWLAALGRGLVGASVAVAFVACMKLAGHWFPANRFATVTGVALLIGNLGGVLAGVPLS EAVAGIGWRNAMLVSAGGTLLLAAAVWLWVRDDPGERSFATYAHPEALSGGGMAPLRSLRLVLSERDTWLLFFAGGMIAA PVLTFAGLWGVPYLVQIHGMTRSEAAGFTTTMLLGFAFGGLLLGSLSDRLQRRKLPYLGAAIVHAGGWLGFLFLPQGPAA GLYLFFAVIGFSAGGLIIGFAFAREVNHPGAAGTVGGVVNMSVLGFAAIQQSGVGWILDRHWAGGGLAGARVYDAAAYHA AFLWLAVSALGAVVCVALTRETHCRLRFDASRR
Specific function: Transport protein for sugar phosphate uptake [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45323; Mature: 45191
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAELRRPPPAALAWLTWGLLASLYFVGYFQRVAPAVMVDELMRDFSIAATLLGNLSAIY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH FYTYAAMQIPSGLLADAVGPRRTGAAAALAAALGIVVFARADSLWLAALGRGLVGASVAV HHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH AFVACMKLAGHWFPANRFATVTGVALLIGNLGGVLAGVPLSEAVAGIGWRNAMLVSAGGT HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCH LLLAAAVWLWVRDDPGERSFATYAHPEALSGGGMAPLRSLRLVLSERDTWLLFFAGGMIA HHHHHHHHHEEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH APVLTFAGLWGVPYLVQIHGMTRSEAAGFTTTMLLGFAFGGLLLGSLSDRLQRRKLPYLG HHHHHHHHHCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAIVHAGGWLGFLFLPQGPAAGLYLFFAVIGFSAGGLIIGFAFAREVNHPGAAGTVGGVV HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHH NMSVLGFAAIQQSGVGWILDRHWAGGGLAGARVYDAAAYHAAFLWLAVSALGAVVCVALT HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RETHCRLRFDASRR CCCCEEEEECCCCC >Mature Secondary Structure GAELRRPPPAALAWLTWGLLASLYFVGYFQRVAPAVMVDELMRDFSIAATLLGNLSAIY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH FYTYAAMQIPSGLLADAVGPRRTGAAAALAAALGIVVFARADSLWLAALGRGLVGASVAV HHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH AFVACMKLAGHWFPANRFATVTGVALLIGNLGGVLAGVPLSEAVAGIGWRNAMLVSAGGT HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCH LLLAAAVWLWVRDDPGERSFATYAHPEALSGGGMAPLRSLRLVLSERDTWLLFFAGGMIA HHHHHHHHHEEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH APVLTFAGLWGVPYLVQIHGMTRSEAAGFTTTMLLGFAFGGLLLGSLSDRLQRRKLPYLG HHHHHHHHHCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAIVHAGGWLGFLFLPQGPAAGLYLFFAVIGFSAGGLIIGFAFAREVNHPGAAGTVGGVV HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHH NMSVLGFAAIQQSGVGWILDRHWAGGGLAGARVYDAAAYHAAFLWLAVSALGAVVCVALT HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RETHCRLRFDASRR CCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]