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The map label for this gene is ycaR [C]

Identifier: 74317524

GI number: 74317524

Start: 1595415

End: 1595603

Strand: Reverse

Name: ycaR [C]

Synonym: Tbd_1506

Alternate gene names: 74317524

Gene position: 1595603-1595415 (Counterclockwise)

Preceding gene: 74317525

Following gene: 74317523

Centisome position: 54.84

GC content: 62.43

Gene sequence:

>189_bases
ATGAACCCCAAATTACTTGAAATCCTCGTCTGCCCCGTCTGCAAAGGCCAGCTCGAGTGGAAAAAATCGGCGCACGAGCT
CGTCTGCCCGGCGTGCCGCCTCGCCTATCCCGTGCGTGACGACATTCCGGTGATGCTGCCTGAGGAGGCGCGCGCCGTCG
GCCCCGACGAAGTTCACGGTCAGGCCTAA

Upstream 100 bases:

>100_bases
CTCTTGACCCTGCTGTCGGTTGCCGACATCCACCTTTATCAGAGCAAGTCACGGCAGCCGGCTCAGGCTGGCGTGCCTGC
ATTTTTCAGGACCGCGATCA

Downstream 100 bases:

>100_bases
GGCGGCCATGCACTTTCGCGTCGTCATTCCCGCGCGCTACGGGTCGAGCCGCCTGCCGGGCAAGCCGCTCGCCGACATCG
GCGGCAGGCCGATGGTGCTG

Product: tetraacyldisaccharide-1-P 4'-kinase

Products: ADP; 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-beta-; $D-glucosamine 1,4'-bisphosphate

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MNPKLLEILVCPVCKGQLEWKKSAHELVCPACRLAYPVRDDIPVMLPEEARAVGPDEVHGQA

Sequences:

>Translated_62_residues
MNPKLLEILVCPVCKGQLEWKKSAHELVCPACRLAYPVRDDIPVMLPEEARAVGPDEVHGQA
>Mature_62_residues
MNPKLLEILVCPVCKGQLEWKKSAHELVCPACRLAYPVRDDIPVMLPEEARAVGPDEVHGQA

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=57, Percent_Identity=49.1228070175439, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1506_THIDA (Q3SIR6)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_315264.1
- ProteinModelPortal:   Q3SIR6
- SMR:   Q3SIR6
- STRING:   Q3SIR6
- GeneID:   3672919
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_1506
- NMPDR:   fig|292415.3.peg.1506
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- PhylomeDB:   Q3SIR6
- BioCyc:   TDEN292415:TBD_1506-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: 2.7.1.130

Molecular weight: Translated: 6865; Mature: 6865

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPKLLEILVCPVCKGQLEWKKSAHELVCPACRLAYPVRDDIPVMLPEEARAVGPDEVHG
CCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCEECCCCCCCCCCCCCCC
QA
CC
>Mature Secondary Structure
MNPKLLEILVCPVCKGQLEWKKSAHELVCPACRLAYPVRDDIPVMLPEEARAVGPDEVHG
CCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCEECCCCCCCCCCCCCCC
QA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 2,3-Bis-(3-hydroxytetradecanoyl)-D-glucosaminyl-(beta-D-1,6)-2,3-; $bis(3-hydroxy-tetradecanoyl)-D-glucosaminyl beta-phosphate

Specific reaction: ATP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-(beta-D-1,6-)- $2,3-bis(3-hydroxy-tetradecanoyl)-D-glucosaminyl beta-phosphate = ADP + 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6- $beta-D-glucosa

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA