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The map label for this gene is yedQ [H]

Identifier: 74317525

GI number: 74317525

Start: 1595584

End: 1596693

Strand: Reverse

Name: yedQ [H]

Synonym: Tbd_1507

Alternate gene names: 74317525

Gene position: 1596693-1595584 (Counterclockwise)

Preceding gene: 74317526

Following gene: 74317524

Centisome position: 54.87

GC content: 65.14

Gene sequence:

>1110_bases
ATGGCAATGCACCATTCGGACCGGGGCGAACGCGCCTGCCGCCGGAAAACCGACGAGGAGGATGGCGCGTTCTGGGCCCC
CGACCGCGGCGAAATCGTCATCCAGTATTTCACCCGATATCTGTTTTTTTCGCTTTCGGTCGTCTACTTCTCGACCGTCG
AAACCCTGCCGTCCGGGTTTCTCGACATCGAGCAGTTGCTGCTCGCACTCGGCGCGTATTTCGTTATCAACAGCTGGCTC
TTTCGTCAGGCGCTGCAAGGTCTCACGCTGCTGAAGATACGCAGCGCGATGAGCGCCGACCTCGCGATCGTCACGGTCTG
CGTCGTCCACGACCCCAATCTCATCCCGCCGTCGGCGCTGGTCTATCTGATGGTTCTGCTCGGCAACGGCATGCGCTACG
GCATGCGCGTCTTCGCCGAAGTGCTCGGCGCCTCGTTCGTCTGCATGGCGTTCGCGTTCGCGCTACGCTACCGCTTTGGC
GGCTTCGTCGTTACGGCCGGCGACGTGTTCTACGGCATCTTCTGGGTGACACTCGCGCTGTACGCCTACATCCTGACGGG
CCGCCTCGAGGGGCAACGCCGCGAGCTCGACCGGTGCAGCCGCGTCGATGCCTTGACCGGCTTGCTGAACCGCCACGGAC
TGCTCGCCGCCGCCGACCGCCTGCTCGGCGGTGCCGGCAACGCGCAGCCCGCGACGGTGTTGTTCGCCGACCTCGATCAG
TTCAAGTCGGTCAACGACCTTTACGGGCACGGCGCGGGCGACCGCGTGCTCGCGCAGTTCGCGCAGATCTTTGCCGAATG
CGCCGAGGAGGGCGTGTGCGGACGCTGGGGCGGCGACGAGTTCGTCGCGATCCTGCCGCCGCGCGACGCCGCGGCCGTAG
CGAAGATCTTCGAGCAGATCGACGCCCGCATCGACGCCTGGAGCAGGAGCAATGCCCTGCCGCTGGCGGCGAGCCTCGGC
GTCGCCCAGGCGCCGCAGGACGGCCACGACCTCTTGACCCTGCTGTCGGTTGCCGACATCCACCTTTATCAGAGCAAGTC
ACGGCAGCCGGCTCAGGCTGGCGTGCCTGCATTTTTCAGGACCGCGATCAATGAACCCCAAATTACTTGA

Upstream 100 bases:

>100_bases
GCGGTCGACCTCGAAGTGGTCCCCGAGGCGGGGTTCGTCGAGTGGTTGCGGACACGGCTCGGATCCTGAAAGAGCCGGAA
CTGGGCAGGGAGGAGGCAGC

Downstream 100 bases:

>100_bases
AATCCTCGTCTGCCCCGTCTGCAAAGGCCAGCTCGAGTGGAAAAAATCGGCGCACGAGCTCGTCTGCCCGGCGTGCCGCC
TCGCCTATCCCGTGCGTGAC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MAMHHSDRGERACRRKTDEEDGAFWAPDRGEIVIQYFTRYLFFSLSVVYFSTVETLPSGFLDIEQLLLALGAYFVINSWL
FRQALQGLTLLKIRSAMSADLAIVTVCVVHDPNLIPPSALVYLMVLLGNGMRYGMRVFAEVLGASFVCMAFAFALRYRFG
GFVVTAGDVFYGIFWVTLALYAYILTGRLEGQRRELDRCSRVDALTGLLNRHGLLAAADRLLGGAGNAQPATVLFADLDQ
FKSVNDLYGHGAGDRVLAQFAQIFAECAEEGVCGRWGGDEFVAILPPRDAAAVAKIFEQIDARIDAWSRSNALPLAASLG
VAQAPQDGHDLLTLLSVADIHLYQSKSRQPAQAGVPAFFRTAINEPQIT

Sequences:

>Translated_369_residues
MAMHHSDRGERACRRKTDEEDGAFWAPDRGEIVIQYFTRYLFFSLSVVYFSTVETLPSGFLDIEQLLLALGAYFVINSWL
FRQALQGLTLLKIRSAMSADLAIVTVCVVHDPNLIPPSALVYLMVLLGNGMRYGMRVFAEVLGASFVCMAFAFALRYRFG
GFVVTAGDVFYGIFWVTLALYAYILTGRLEGQRRELDRCSRVDALTGLLNRHGLLAAADRLLGGAGNAQPATVLFADLDQ
FKSVNDLYGHGAGDRVLAQFAQIFAECAEEGVCGRWGGDEFVAILPPRDAAAVAKIFEQIDARIDAWSRSNALPLAASLG
VAQAPQDGHDLLTLLSVADIHLYQSKSRQPAQAGVPAFFRTAINEPQIT
>Mature_368_residues
AMHHSDRGERACRRKTDEEDGAFWAPDRGEIVIQYFTRYLFFSLSVVYFSTVETLPSGFLDIEQLLLALGAYFVINSWLF
RQALQGLTLLKIRSAMSADLAIVTVCVVHDPNLIPPSALVYLMVLLGNGMRYGMRVFAEVLGASFVCMAFAFALRYRFGG
FVVTAGDVFYGIFWVTLALYAYILTGRLEGQRRELDRCSRVDALTGLLNRHGLLAAADRLLGGAGNAQPATVLFADLDQF
KSVNDLYGHGAGDRVLAQFAQIFAECAEEGVCGRWGGDEFVAILPPRDAAAVAKIFEQIDARIDAWSRSNALPLAASLGV
AQAPQDGHDLLTLLSVADIHLYQSKSRQPAQAGVPAFFRTAINEPQIT

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=164, Percent_Identity=36.5853658536585, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI87081881, Length=163, Percent_Identity=34.9693251533742, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI145693134, Length=152, Percent_Identity=33.5526315789474, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI87081977, Length=176, Percent_Identity=31.8181818181818, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1787541, Length=162, Percent_Identity=30.8641975308642, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786584, Length=252, Percent_Identity=27.3809523809524, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787802, Length=154, Percent_Identity=34.4155844155844, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788956, Length=99, Percent_Identity=37.3737373737374, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788381, Length=159, Percent_Identity=31.4465408805031, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 40472; Mature: 40341

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMHHSDRGERACRRKTDEEDGAFWAPDRGEIVIQYFTRYLFFSLSVVYFSTVETLPSGF
CCCCCCCCHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LDIEQLLLALGAYFVINSWLFRQALQGLTLLKIRSAMSADLAIVTVCVVHDPNLIPPSAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHHH
VYLMVLLGNGMRYGMRVFAEVLGASFVCMAFAFALRYRFGGFVVTAGDVFYGIFWVTLAL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH
YAYILTGRLEGQRRELDRCSRVDALTGLLNRHGLLAAADRLLGGAGNAQPATVLFADLDQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHEEEHHHHH
FKSVNDLYGHGAGDRVLAQFAQIFAECAEEGVCGRWGGDEFVAILPPRDAAAVAKIFEQI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
DARIDAWSRSNALPLAASLGVAQAPQDGHDLLTLLSVADIHLYQSKSRQPAQAGVPAFFR
HHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHH
TAINEPQIT
HHCCCCCCC
>Mature Secondary Structure 
AMHHSDRGERACRRKTDEEDGAFWAPDRGEIVIQYFTRYLFFSLSVVYFSTVETLPSGF
CCCCCCCHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LDIEQLLLALGAYFVINSWLFRQALQGLTLLKIRSAMSADLAIVTVCVVHDPNLIPPSAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHHH
VYLMVLLGNGMRYGMRVFAEVLGASFVCMAFAFALRYRFGGFVVTAGDVFYGIFWVTLAL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH
YAYILTGRLEGQRRELDRCSRVDALTGLLNRHGLLAAADRLLGGAGNAQPATVLFADLDQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHEEEHHHHH
FKSVNDLYGHGAGDRVLAQFAQIFAECAEEGVCGRWGGDEFVAILPPRDAAAVAKIFEQI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
DARIDAWSRSNALPLAASLGVAQAPQDGHDLLTLLSVADIHLYQSKSRQPAQAGVPAFFR
HHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHH
TAINEPQIT
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA