| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317507
Identifier: 74317507
GI number: 74317507
Start: 1577025
End: 1578020
Strand: Reverse
Name: 74317507
Synonym: Tbd_1489
Alternate gene names: NA
Gene position: 1578020-1577025 (Counterclockwise)
Preceding gene: 74317508
Following gene: 74317504
Centisome position: 54.23
GC content: 55.72
Gene sequence:
>996_bases GTGGATGCCATCGTCAACACGGTGAATTGTGTTGGCGTGATGGGCAAAGGCATTGCGCTCCAGTTCAAGAACAAGTGGCC GGCGAATTACAGCGCCTACGAAGCGGCGTGCAAAGCCAAACAAGTTCGTCCGGGAACCATGTTTGTCTTCGACTCCGGCG GCTTGGTCAAACCCAACTACATCATCAACTTCCCAACCAAGGACCATTGGCGCGGCAAGTCACGAGTTGAGTTCATTCGT GATGGGCTGGTTGATCTGGTTGCACAAGTCAAACGGCTTGGCATTCGCTCCATTGCCATTCCACCGCTTGGTTGCGGCAA CGGCGGGCTGGAATGGGATGAAGTGCGCCCGCTTATCGAACAGGCATTTGCCGTTCTGCCAGACGTGGAAGTGCGACTAT TCGCGCCTGCTGGCGCGCCTGATCCGAAGAGCATGGAAGTGAAAACCTCACGTCCAAAGATGACGGCGGGTCGCGCAGCT ATCCTCAAGGTACTCGATACCTATCGTTCTCTGGAATACGGTTTGTCTCGTATCGAAGTGCAGAAGCTTGCTTACTTCCT GCAAGAGGCTGGCGAGAGCCTCAGTCTGTCATTCGTCAAGAATCAATATGGACCCTATTCCGATCAACTGCGCCACGCGC TGAACCGGATGGAGGGCCACTTCATACGTGGCCTTGGCGATGGCGTTGTGGATGCTGAAATCGAACCGCTGGAAGACGCA CTTGCCGAGGCAGAGCAGTACGTCAGTGCAAGCGGGCACGCTGCTTTGGCCCGGCACGTTGAGCGTGTCGCGAATCTGAT CGAGGGTTTTCAGACGCCATACGGAATGGAATTACTGGCTACGGTTCATTGGGTTGCAACCCATGAACCGACCGCGCATT CATTCGATCAGGTAGTCAGCGCCGTACATGCCTGGAATGAGCGCAAGGCAAGGATCATGCAGCCTGCGCATGTGCGGGCT GCATGGAGTCGGCTAGACGCTCAAGGGTGGCTATAA
Upstream 100 bases:
>100_bases GCGTAAAATTGCCGGTGGTGGTTAAACCCGAGTGGTATTTTCTGGGGCAATAGACGTGACAATCACGATTAAACAGGGCG ATTTGTTACGGCAGGACGAT
Downstream 100 bases:
>100_bases GCTTAACTCTAGGAGTCGTGGAAAGGTCAGACGCGATACTCAAATCGTAGGTTTGTACCTGTCCGCGTAACCCGGTCAAA GCTGAATACATGTTCGTCCG
Product: Appr-1-p processing protein
Products: NA
Alternate protein names: Appr-1-P Processing Domain Protein; Appr-1-P Processing Family Protein; Appr-1-P Processing Protein; Appr-1-P Processing; Appr-1-P Processing Family
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MDAIVNTVNCVGVMGKGIALQFKNKWPANYSAYEAACKAKQVRPGTMFVFDSGGLVKPNYIINFPTKDHWRGKSRVEFIR DGLVDLVAQVKRLGIRSIAIPPLGCGNGGLEWDEVRPLIEQAFAVLPDVEVRLFAPAGAPDPKSMEVKTSRPKMTAGRAA ILKVLDTYRSLEYGLSRIEVQKLAYFLQEAGESLSLSFVKNQYGPYSDQLRHALNRMEGHFIRGLGDGVVDAEIEPLEDA LAEAEQYVSASGHAALARHVERVANLIEGFQTPYGMELLATVHWVATHEPTAHSFDQVVSAVHAWNERKARIMQPAHVRA AWSRLDAQGWL
Sequences:
>Translated_331_residues MDAIVNTVNCVGVMGKGIALQFKNKWPANYSAYEAACKAKQVRPGTMFVFDSGGLVKPNYIINFPTKDHWRGKSRVEFIR DGLVDLVAQVKRLGIRSIAIPPLGCGNGGLEWDEVRPLIEQAFAVLPDVEVRLFAPAGAPDPKSMEVKTSRPKMTAGRAA ILKVLDTYRSLEYGLSRIEVQKLAYFLQEAGESLSLSFVKNQYGPYSDQLRHALNRMEGHFIRGLGDGVVDAEIEPLEDA LAEAEQYVSASGHAALARHVERVANLIEGFQTPYGMELLATVHWVATHEPTAHSFDQVVSAVHAWNERKARIMQPAHVRA AWSRLDAQGWL >Mature_331_residues MDAIVNTVNCVGVMGKGIALQFKNKWPANYSAYEAACKAKQVRPGTMFVFDSGGLVKPNYIINFPTKDHWRGKSRVEFIR DGLVDLVAQVKRLGIRSIAIPPLGCGNGGLEWDEVRPLIEQAFAVLPDVEVRLFAPAGAPDPKSMEVKTSRPKMTAGRAA ILKVLDTYRSLEYGLSRIEVQKLAYFLQEAGESLSLSFVKNQYGPYSDQLRHALNRMEGHFIRGLGDGVVDAEIEPLEDA LAEAEQYVSASGHAALARHVERVANLIEGFQTPYGMELLATVHWVATHEPTAHSFDQVVSAVHAWNERKARIMQPAHVRA AWSRLDAQGWL
Specific function: Unknown
COG id: COG2110
COG function: function code R; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36619; Mature: 36619
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS51154 MACRO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIVNTVNCVGVMGKGIALQFKNKWPANYSAYEAACKAKQVRPGTMFVFDSGGLVKPNY CCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCE IINFPTKDHWRGKSRVEFIRDGLVDLVAQVKRLGIRSIAIPPLGCGNGGLEWDEVRPLIE EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHH QAFAVLPDVEVRLFAPAGAPDPKSMEVKTSRPKMTAGRAAILKVLDTYRSLEYGLSRIEV HHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QKLAYFLQEAGESLSLSFVKNQYGPYSDQLRHALNRMEGHFIRGLGDGVVDAEIEPLEDA HHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHH LAEAEQYVSASGHAALARHVERVANLIEGFQTPYGMELLATVHWVATHEPTAHSFDQVVS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH AVHAWNERKARIMQPAHVRAAWSRLDAQGWL HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDAIVNTVNCVGVMGKGIALQFKNKWPANYSAYEAACKAKQVRPGTMFVFDSGGLVKPNY CCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCE IINFPTKDHWRGKSRVEFIRDGLVDLVAQVKRLGIRSIAIPPLGCGNGGLEWDEVRPLIE EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHH QAFAVLPDVEVRLFAPAGAPDPKSMEVKTSRPKMTAGRAAILKVLDTYRSLEYGLSRIEV HHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QKLAYFLQEAGESLSLSFVKNQYGPYSDQLRHALNRMEGHFIRGLGDGVVDAEIEPLEDA HHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHH LAEAEQYVSASGHAALARHVERVANLIEGFQTPYGMELLATVHWVATHEPTAHSFDQVVS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH AVHAWNERKARIMQPAHVRAAWSRLDAQGWL HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA