| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317508
Identifier: 74317508
GI number: 74317508
Start: 1578068
End: 1578748
Strand: Reverse
Name: 74317508
Synonym: Tbd_1490
Alternate gene names: NA
Gene position: 1578748-1578068 (Counterclockwise)
Preceding gene: 74317509
Following gene: 74317507
Centisome position: 54.26
GC content: 57.56
Gene sequence:
>681_bases ATGGCGGTGCCAAATCCTGTCCGCCTGTTTCACATCACGGCAATTGCCAATTTGCCGGCAATTTGTGCGGCAGGCGCGTT GCTGTCCAAGAATCAGGGCGCAACGAATGGCATTGCTTACCAGAATATCGCCCATCAAGGTGCGCAGGGTGCCCGCTCCA TCAAGTCAGTGCCTAACCCGCCGGGCGGGCTGGTTCACGACTTTGTGCCGTTCTATTTCGCGCCGCGTTCGCCCATGCTT TTAGCCATCAACGGCGGGCGTGTCGCTGGATGTGACTGGCGGCAGGCGGATATTGCCCATTTTGAAACGACGGTGGAACA TGTGACGGCAGCGGGGGAAGACTTTGTGTTCTATGACCTCAATGCAACGCTGGCCTGGAGCACACCGTATACGGGCTTGG CCAACCTCGACAAAGTGGCTTGGGATTTGATCTGCGAGTCGCCCGCCCTGGATGGCTACTGCAAGTATTGGCAGAGCAAA CTGGACCATGCACGTTATAGCGACCGAATGGAGCGGCGGCAGGCCGAGTTTCTGGTCAAAGGCATGGTGCCCTTGGTCAG ATTTACGCGCATCGGCGCGATCGATCGAGGCCACGCCGACGTGGTACGTGCGATTCTGGATCAGGCAGGCGTAAAATTGC CGGTGGTGGTTAAACCCGAGTGGTATTTTCTGGGGCAATAG
Upstream 100 bases:
>100_bases CCTACACCCAGGCTGGCCGCTATACCGTGGCCGTAAAGGTGATTGATATCTTCGGCAACGACACCATGGTGCTGGTGCCG GTGAGCGTGGGCTAAGCGCC
Downstream 100 bases:
>100_bases ACGTGACAATCACGATTAAACAGGGCGATTTGTTACGGCAGGACGATGTGGATGCCATCGTCAACACGGTGAATTGTGTT GGCGTGATGGGCAAAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MAVPNPVRLFHITAIANLPAICAAGALLSKNQGATNGIAYQNIAHQGAQGARSIKSVPNPPGGLVHDFVPFYFAPRSPML LAINGGRVAGCDWRQADIAHFETTVEHVTAAGEDFVFYDLNATLAWSTPYTGLANLDKVAWDLICESPALDGYCKYWQSK LDHARYSDRMERRQAEFLVKGMVPLVRFTRIGAIDRGHADVVRAILDQAGVKLPVVVKPEWYFLGQ
Sequences:
>Translated_226_residues MAVPNPVRLFHITAIANLPAICAAGALLSKNQGATNGIAYQNIAHQGAQGARSIKSVPNPPGGLVHDFVPFYFAPRSPML LAINGGRVAGCDWRQADIAHFETTVEHVTAAGEDFVFYDLNATLAWSTPYTGLANLDKVAWDLICESPALDGYCKYWQSK LDHARYSDRMERRQAEFLVKGMVPLVRFTRIGAIDRGHADVVRAILDQAGVKLPVVVKPEWYFLGQ >Mature_225_residues AVPNPVRLFHITAIANLPAICAAGALLSKNQGATNGIAYQNIAHQGAQGARSIKSVPNPPGGLVHDFVPFYFAPRSPMLL AINGGRVAGCDWRQADIAHFETTVEHVTAAGEDFVFYDLNATLAWSTPYTGLANLDKVAWDLICESPALDGYCKYWQSKL DHARYSDRMERRQAEFLVKGMVPLVRFTRIGAIDRGHADVVRAILDQAGVKLPVVVKPEWYFLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24777; Mature: 24645
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPNPVRLFHITAIANLPAICAAGALLSKNQGATNGIAYQNIAHQGAQGARSIKSVPNP CCCCCCEEEEEEEHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCC PGGLVHDFVPFYFAPRSPMLLAINGGRVAGCDWRQADIAHFETTVEHVTAAGEDFVFYDL CCCHHHHHHHHEECCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC NATLAWSTPYTGLANLDKVAWDLICESPALDGYCKYWQSKLDHARYSDRMERRQAEFLVK CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMVPLVRFTRIGAIDRGHADVVRAILDQAGVKLPVVVKPEWYFLGQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEECCC >Mature Secondary Structure AVPNPVRLFHITAIANLPAICAAGALLSKNQGATNGIAYQNIAHQGAQGARSIKSVPNP CCCCCEEEEEEEHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCC PGGLVHDFVPFYFAPRSPMLLAINGGRVAGCDWRQADIAHFETTVEHVTAAGEDFVFYDL CCCHHHHHHHHEECCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC NATLAWSTPYTGLANLDKVAWDLICESPALDGYCKYWQSKLDHARYSDRMERRQAEFLVK CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMVPLVRFTRIGAIDRGHADVVRAILDQAGVKLPVVVKPEWYFLGQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA