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The map label for this gene is ynaI [H]

Identifier: 74317480

GI number: 74317480

Start: 1546750

End: 1547871

Strand: Direct

Name: ynaI [H]

Synonym: Tbd_1462

Alternate gene names: 74317480

Gene position: 1546750-1547871 (Clockwise)

Preceding gene: 74317479

Following gene: 74317481

Centisome position: 53.16

GC content: 64.35

Gene sequence:

>1122_bases
ATGTTTGATCTTCTGGAAAACTTTGGCAAATCATTCATCGCCTCGTCGTGGCTGCCGCAAGTCTTGCTCGTGACCGGCGC
CGTCGTCACGGTCAACGTCGTCGCCTACACCGTTCTCCACTACCTCGAAAAAGCCGCGCGCCGGACCGCCGCGGTGTGGG
ACGACGCCCTGATTCAGGCGGCGCGCCGGCCGGCGACGCTGGCGCTCTGGGTGATCGGCGCGTATTACGCGGCCCGCGTC
ATCTACGCGCACCAGGAGCGCAGCTTCCCCGACGGCCTCACGCTCGCGCGCGACAGCGTCGTCATCGCCGCCTTCGCCTG
GTTCCTGCTGCGCCTGATCGGCAACGCGGCGCGCGGCATGCGGGCACGCGCGCTCGAACCGGGGTGCAAGGTCGATCTGA
CGACCGTCGACGCGCTGTCGAAGCTCGGACGCATCAGCATCGTCGTTCTTGCCGGTCTCGTCGTCGCGCAAACCCTCGGG
TTCAGCGTCTCGGGCGTGCTCGCCTTCGGCGGCATAGGCGGCATCGCGGTCGGTTTCGCTGCCAAGGACATGCTCGCCAA
CTTCTTCGGCGGGCTGACGATCTACCTCGACCGCCCCTTCGTCGTCGGCGAATGGATCCGCTCGCCGGACAAGGAGATCG
AAGGCACCGTCGAATACATCGGCTGGCGTCACACGCGGGTGCGTGCGTTCAACAAGAATCCGATCTATGTGCCGAACGCG
CTGTTCACCAACATCGTCGTCGAAAACCCGACCCGCATGACCAATCGGCGCATCAAGGAAACGATCGGCATCCGCTATCA
GGATTTCGACAAGATGGCGGCGATCGTCGCCGAGGTGAAAGCCATGCTGCAGGCGCATCCCGAAATCGACAGCGAGACGA
CGCTGATCGTCAGCTTCAACGCCTTCGCCGCGTCGTCGCTCGATTTCTTCGTCTACACCTTCACGCGCACTGTCGAGTGG
ATTCACTTCCACGAGGTCAAGCAGGACGTGCTGCTGAAAATCGGCGCGATCATCAGCGCCCACGGCGCCGAGATCGCCTA
TCCCACGCGCAGCCTGCACATCGAATCGACCCTCGATCCGGCCTCGTCCGAGCCGCGAGCGCCCACAGCCGACGCGGCCT
GA

Upstream 100 bases:

>100_bases
TGGCGGACCGATATAGGAAACTGTCGGCCCCGCAGGCCCCTCCGGAGAACTGCCTCGGGCGCCGATTCCACCTCGAATCC
ACCTGACGGAAAGCACGTAA

Downstream 100 bases:

>100_bases
GCGCTGGCCGCCTTGCCGAATAACGGCCCGAGGCGGCATAATGGCGGTCTTCAGTCAGTCCCTTCCGTGCCCGCACGGGC
ATCCGTCGGTTCTCCTCACT

Product: small-conductance mechanosensitive channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MFDLLENFGKSFIASSWLPQVLLVTGAVVTVNVVAYTVLHYLEKAARRTAAVWDDALIQAARRPATLALWVIGAYYAARV
IYAHQERSFPDGLTLARDSVVIAAFAWFLLRLIGNAARGMRARALEPGCKVDLTTVDALSKLGRISIVVLAGLVVAQTLG
FSVSGVLAFGGIGGIAVGFAAKDMLANFFGGLTIYLDRPFVVGEWIRSPDKEIEGTVEYIGWRHTRVRAFNKNPIYVPNA
LFTNIVVENPTRMTNRRIKETIGIRYQDFDKMAAIVAEVKAMLQAHPEIDSETTLIVSFNAFAASSLDFFVYTFTRTVEW
IHFHEVKQDVLLKIGAIISAHGAEIAYPTRSLHIESTLDPASSEPRAPTADAA

Sequences:

>Translated_373_residues
MFDLLENFGKSFIASSWLPQVLLVTGAVVTVNVVAYTVLHYLEKAARRTAAVWDDALIQAARRPATLALWVIGAYYAARV
IYAHQERSFPDGLTLARDSVVIAAFAWFLLRLIGNAARGMRARALEPGCKVDLTTVDALSKLGRISIVVLAGLVVAQTLG
FSVSGVLAFGGIGGIAVGFAAKDMLANFFGGLTIYLDRPFVVGEWIRSPDKEIEGTVEYIGWRHTRVRAFNKNPIYVPNA
LFTNIVVENPTRMTNRRIKETIGIRYQDFDKMAAIVAEVKAMLQAHPEIDSETTLIVSFNAFAASSLDFFVYTFTRTVEW
IHFHEVKQDVLLKIGAIISAHGAEIAYPTRSLHIESTLDPASSEPRAPTADAA
>Mature_373_residues
MFDLLENFGKSFIASSWLPQVLLVTGAVVTVNVVAYTVLHYLEKAARRTAAVWDDALIQAARRPATLALWVIGAYYAARV
IYAHQERSFPDGLTLARDSVVIAAFAWFLLRLIGNAARGMRARALEPGCKVDLTTVDALSKLGRISIVVLAGLVVAQTLG
FSVSGVLAFGGIGGIAVGFAAKDMLANFFGGLTIYLDRPFVVGEWIRSPDKEIEGTVEYIGWRHTRVRAFNKNPIYVPNA
LFTNIVVENPTRMTNRRIKETIGIRYQDFDKMAAIVAEVKAMLQAHPEIDSETTLIVSFNAFAASSLDFFVYTFTRTVEW
IHFHEVKQDVLLKIGAIISAHGAEIAYPTRSLHIESTLDPASSEPRAPTADAA

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=229, Percent_Identity=51.0917030567686, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1789291, Length=262, Percent_Identity=27.4809160305344, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 40934; Mature: 40934

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLLENFGKSFIASSWLPQVLLVTGAVVTVNVVAYTVLHYLEKAARRTAAVWDDALIQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRPATLALWVIGAYYAARVIYAHQERSFPDGLTLARDSVVIAAFAWFLLRLIGNAARGM
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RARALEPGCKVDLTTVDALSKLGRISIVVLAGLVVAQTLGFSVSGVLAFGGIGGIAVGFA
HHHCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH
AKDMLANFFGGLTIYLDRPFVVGEWIRSPDKEIEGTVEYIGWRHTRVRAFNKNPIYVPNA
HHHHHHHHHCCEEEEEECCEEEHHHHCCCCHHHCCHHHHHCCCCCEEEEECCCCEEECCH
LFTNIVVENPTRMTNRRIKETIGIRYQDFDKMAAIVAEVKAMLQAHPEIDSETTLIVSFN
HHHHEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
AFAASSLDFFVYTFTRTVEWIHFHEVKQDVLLKIGAIISAHGAEIAYPTRSLHIESTLDP
CHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCC
ASSEPRAPTADAA
CCCCCCCCCCCCC
>Mature Secondary Structure
MFDLLENFGKSFIASSWLPQVLLVTGAVVTVNVVAYTVLHYLEKAARRTAAVWDDALIQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRPATLALWVIGAYYAARVIYAHQERSFPDGLTLARDSVVIAAFAWFLLRLIGNAARGM
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RARALEPGCKVDLTTVDALSKLGRISIVVLAGLVVAQTLGFSVSGVLAFGGIGGIAVGFA
HHHCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH
AKDMLANFFGGLTIYLDRPFVVGEWIRSPDKEIEGTVEYIGWRHTRVRAFNKNPIYVPNA
HHHHHHHHHCCEEEEEECCEEEHHHHCCCCHHHCCHHHHHCCCCCEEEEECCCCEEECCH
LFTNIVVENPTRMTNRRIKETIGIRYQDFDKMAAIVAEVKAMLQAHPEIDSETTLIVSFN
HHHHEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
AFAASSLDFFVYTFTRTVEWIHFHEVKQDVLLKIGAIISAHGAEIAYPTRSLHIESTLDP
CHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCC
ASSEPRAPTADAA
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]